Chloroplast genome sequence of the hybrid variety ‘Gagsi’, one of the colored calla lilies (Zantedeschia spp.)

The complete chloroplast genome of Zantedeschia spp. in the family Araceae was constituted by de novo assembly using a small amount of whole genome sequencing data. The chloroplast genome of Zantedeschia spp. was the circular DNA molecule with a length of 175,448 bp and consisted of 90,244 bp of lar...

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Autores principales: Kim, Jong-Bo, Yang, Hwan-Rae, Lee, Sang-Hee, Kim, Young-Jin, Park, Tae-Ho
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
MitoGenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782914/
https://www.ncbi.nlm.nih.gov/pubmed/33458210
http://dx.doi.org/10.1080/23802359.2020.1827060
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author Kim, Jong-Bo
Yang, Hwan-Rae
Lee, Sang-Hee
Kim, Young-Jin
Park, Tae-Ho
author_facet Kim, Jong-Bo
Yang, Hwan-Rae
Lee, Sang-Hee
Kim, Young-Jin
Park, Tae-Ho
author_sort Kim, Jong-Bo
collection PubMed
description The complete chloroplast genome of Zantedeschia spp. in the family Araceae was constituted by de novo assembly using a small amount of whole genome sequencing data. The chloroplast genome of Zantedeschia spp. was the circular DNA molecule with a length of 175,448 bp and consisted of 90,244 bp of large single copy, 8334 bp of small single copy, and 38,435 bp of a pair of inverted repeat regions. A total of 163 genes were annotated including 109 protein-coding genes, 46 tRNA genes and eight rRNA genes. Maximum likelihood phylogenetic analysis with 16 Araceae species revealed that Zantedeschia spp. is expectedly grouped with other Zantedeschia species.
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spelling pubmed-77829142021-01-14 Chloroplast genome sequence of the hybrid variety ‘Gagsi’, one of the colored calla lilies (Zantedeschia spp.) Kim, Jong-Bo Yang, Hwan-Rae Lee, Sang-Hee Kim, Young-Jin Park, Tae-Ho Mitochondrial DNA B Resour MitoGenome Announcement The complete chloroplast genome of Zantedeschia spp. in the family Araceae was constituted by de novo assembly using a small amount of whole genome sequencing data. The chloroplast genome of Zantedeschia spp. was the circular DNA molecule with a length of 175,448 bp and consisted of 90,244 bp of large single copy, 8334 bp of small single copy, and 38,435 bp of a pair of inverted repeat regions. A total of 163 genes were annotated including 109 protein-coding genes, 46 tRNA genes and eight rRNA genes. Maximum likelihood phylogenetic analysis with 16 Araceae species revealed that Zantedeschia spp. is expectedly grouped with other Zantedeschia species. Taylor & Francis 2020-10-05 /pmc/articles/PMC7782914/ /pubmed/33458210 http://dx.doi.org/10.1080/23802359.2020.1827060 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle MitoGenome Announcement
Kim, Jong-Bo
Yang, Hwan-Rae
Lee, Sang-Hee
Kim, Young-Jin
Park, Tae-Ho
Chloroplast genome sequence of the hybrid variety ‘Gagsi’, one of the colored calla lilies (Zantedeschia spp.)
title Chloroplast genome sequence of the hybrid variety ‘Gagsi’, one of the colored calla lilies (Zantedeschia spp.)
title_full Chloroplast genome sequence of the hybrid variety ‘Gagsi’, one of the colored calla lilies (Zantedeschia spp.)
title_fullStr Chloroplast genome sequence of the hybrid variety ‘Gagsi’, one of the colored calla lilies (Zantedeschia spp.)
title_full_unstemmed Chloroplast genome sequence of the hybrid variety ‘Gagsi’, one of the colored calla lilies (Zantedeschia spp.)
title_short Chloroplast genome sequence of the hybrid variety ‘Gagsi’, one of the colored calla lilies (Zantedeschia spp.)
title_sort chloroplast genome sequence of the hybrid variety ‘gagsi’, one of the colored calla lilies (zantedeschia spp.)
topic MitoGenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782914/
https://www.ncbi.nlm.nih.gov/pubmed/33458210
http://dx.doi.org/10.1080/23802359.2020.1827060
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