The complete chloroplast genome of Ilex ‘Emily Bruner’, Ilex cornuta ‘Burfordii’ × Ilex latifolia (Aquifoliaceae)

Ilex ‘Emily Bruner’ is an important economic plant with ornamental and ecological functions in southeastern China. In this study, we characterized the complete chloroplast (cp) genome sequence of ‘Emily Bruner’ to investigate its phylogenetic relationship. The entire cp genome of ‘Emily Bruner’ was...

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Autores principales: Zhang, Fan, Li, Yunlong, Sun, Linhe, Zhou, Yanwei, Chen, Hong, Lu, Xiaoqing, Li, Naiwei, Wang, Chuanyong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782960/
https://www.ncbi.nlm.nih.gov/pubmed/33458120
http://dx.doi.org/10.1080/23802359.2020.1810146
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author Zhang, Fan
Li, Yunlong
Sun, Linhe
Zhou, Yanwei
Chen, Hong
Lu, Xiaoqing
Li, Naiwei
Wang, Chuanyong
author_facet Zhang, Fan
Li, Yunlong
Sun, Linhe
Zhou, Yanwei
Chen, Hong
Lu, Xiaoqing
Li, Naiwei
Wang, Chuanyong
author_sort Zhang, Fan
collection PubMed
description Ilex ‘Emily Bruner’ is an important economic plant with ornamental and ecological functions in southeastern China. In this study, we characterized the complete chloroplast (cp) genome sequence of ‘Emily Bruner’ to investigate its phylogenetic relationship. The entire cp genome of ‘Emily Bruner’ was 157,216 bp in length with 37.68% overall GC content, including a large single-copy (LSC) region of 86,721 bp and a small single-copy (SSC) region of 18,427 bp, which were separated by a pair of inverted repeats (IRs) of 52,068 bp. The cp genome contained 135 genes, including 90 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Phylogenetic analysis based on whole cp genome sequences showed that ‘Emily Bruner’ is closest to I. cornuta species.
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spelling pubmed-77829602021-01-14 The complete chloroplast genome of Ilex ‘Emily Bruner’, Ilex cornuta ‘Burfordii’ × Ilex latifolia (Aquifoliaceae) Zhang, Fan Li, Yunlong Sun, Linhe Zhou, Yanwei Chen, Hong Lu, Xiaoqing Li, Naiwei Wang, Chuanyong Mitochondrial DNA B Resour Mitogenome Announcement Ilex ‘Emily Bruner’ is an important economic plant with ornamental and ecological functions in southeastern China. In this study, we characterized the complete chloroplast (cp) genome sequence of ‘Emily Bruner’ to investigate its phylogenetic relationship. The entire cp genome of ‘Emily Bruner’ was 157,216 bp in length with 37.68% overall GC content, including a large single-copy (LSC) region of 86,721 bp and a small single-copy (SSC) region of 18,427 bp, which were separated by a pair of inverted repeats (IRs) of 52,068 bp. The cp genome contained 135 genes, including 90 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Phylogenetic analysis based on whole cp genome sequences showed that ‘Emily Bruner’ is closest to I. cornuta species. Taylor & Francis 2020-08-26 /pmc/articles/PMC7782960/ /pubmed/33458120 http://dx.doi.org/10.1080/23802359.2020.1810146 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zhang, Fan
Li, Yunlong
Sun, Linhe
Zhou, Yanwei
Chen, Hong
Lu, Xiaoqing
Li, Naiwei
Wang, Chuanyong
The complete chloroplast genome of Ilex ‘Emily Bruner’, Ilex cornuta ‘Burfordii’ × Ilex latifolia (Aquifoliaceae)
title The complete chloroplast genome of Ilex ‘Emily Bruner’, Ilex cornuta ‘Burfordii’ × Ilex latifolia (Aquifoliaceae)
title_full The complete chloroplast genome of Ilex ‘Emily Bruner’, Ilex cornuta ‘Burfordii’ × Ilex latifolia (Aquifoliaceae)
title_fullStr The complete chloroplast genome of Ilex ‘Emily Bruner’, Ilex cornuta ‘Burfordii’ × Ilex latifolia (Aquifoliaceae)
title_full_unstemmed The complete chloroplast genome of Ilex ‘Emily Bruner’, Ilex cornuta ‘Burfordii’ × Ilex latifolia (Aquifoliaceae)
title_short The complete chloroplast genome of Ilex ‘Emily Bruner’, Ilex cornuta ‘Burfordii’ × Ilex latifolia (Aquifoliaceae)
title_sort complete chloroplast genome of ilex ‘emily bruner’, ilex cornuta ‘burfordii’ × ilex latifolia (aquifoliaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782960/
https://www.ncbi.nlm.nih.gov/pubmed/33458120
http://dx.doi.org/10.1080/23802359.2020.1810146
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