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The complete chloroplast genome sequence of Michelia compressa
Michelia compressa is an evergreen ornamental tree species. The high-throughput sequencing technology was used to sequence and assemble the chloroplast genome of Michelia compressa. Results showed that the chloroplast genome is 160,061 bp in length, of which the inverted repeats sequence (IRs) is 26...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782975/ https://www.ncbi.nlm.nih.gov/pubmed/33458137 http://dx.doi.org/10.1080/23802359.2020.1788434 |
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author | Zhou, Dongqin Lu, Shipeng Hou, Zhaoqi Yu, Jinping |
author_facet | Zhou, Dongqin Lu, Shipeng Hou, Zhaoqi Yu, Jinping |
author_sort | Zhou, Dongqin |
collection | PubMed |
description | Michelia compressa is an evergreen ornamental tree species. The high-throughput sequencing technology was used to sequence and assemble the chloroplast genome of Michelia compressa. Results showed that the chloroplast genome is 160,061 bp in length, of which the inverted repeats sequence (IRs) is 26,581 bp, the large single-copy region (LSC) and the small single copy region (SSC) are 88,097 bp and 18,802 bp, respectively. The GC content of the plastome was 39.2%, with 43.2%, 37.9% and 34.2% in IRs, LSC and SSC, respectively. A total of 132 genes are annotated, 86 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. This study enriched the Michelia compressa genomic information which provides the basis for rational exploitation and utilization of germplasm resources. |
format | Online Article Text |
id | pubmed-7782975 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77829752021-01-14 The complete chloroplast genome sequence of Michelia compressa Zhou, Dongqin Lu, Shipeng Hou, Zhaoqi Yu, Jinping Mitochondrial DNA B Resour Mitogenome Announcement Michelia compressa is an evergreen ornamental tree species. The high-throughput sequencing technology was used to sequence and assemble the chloroplast genome of Michelia compressa. Results showed that the chloroplast genome is 160,061 bp in length, of which the inverted repeats sequence (IRs) is 26,581 bp, the large single-copy region (LSC) and the small single copy region (SSC) are 88,097 bp and 18,802 bp, respectively. The GC content of the plastome was 39.2%, with 43.2%, 37.9% and 34.2% in IRs, LSC and SSC, respectively. A total of 132 genes are annotated, 86 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. This study enriched the Michelia compressa genomic information which provides the basis for rational exploitation and utilization of germplasm resources. Taylor & Francis 2020-09-01 /pmc/articles/PMC7782975/ /pubmed/33458137 http://dx.doi.org/10.1080/23802359.2020.1788434 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Zhou, Dongqin Lu, Shipeng Hou, Zhaoqi Yu, Jinping The complete chloroplast genome sequence of Michelia compressa |
title | The complete chloroplast genome sequence of Michelia compressa |
title_full | The complete chloroplast genome sequence of Michelia compressa |
title_fullStr | The complete chloroplast genome sequence of Michelia compressa |
title_full_unstemmed | The complete chloroplast genome sequence of Michelia compressa |
title_short | The complete chloroplast genome sequence of Michelia compressa |
title_sort | complete chloroplast genome sequence of michelia compressa |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782975/ https://www.ncbi.nlm.nih.gov/pubmed/33458137 http://dx.doi.org/10.1080/23802359.2020.1788434 |
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