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Characterization and comparison of mitogenomes of three ‘eyed’ turtles Sacalia spp
In this paper, we characterized the mitogenomes of three ‘eyed’ turtles, the Beal’s Eyed turtle (Sacalia bealei), the Four Eye-spotted turtle (S. quadriocellata), and the Hainan Four Eye-spotted turtle which was a unique lineage in the four-eyed turtle and considered as an independent species S. ins...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782976/ https://www.ncbi.nlm.nih.gov/pubmed/33458106 http://dx.doi.org/10.1080/23802359.2020.1806750 |
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author | Lin, Liu Chen, Huaiqing Wang, Zhao Gaillard, Daniel Zhai, Xiaofei Shi, Haitao |
author_facet | Lin, Liu Chen, Huaiqing Wang, Zhao Gaillard, Daniel Zhai, Xiaofei Shi, Haitao |
author_sort | Lin, Liu |
collection | PubMed |
description | In this paper, we characterized the mitogenomes of three ‘eyed’ turtles, the Beal’s Eyed turtle (Sacalia bealei), the Four Eye-spotted turtle (S. quadriocellata), and the Hainan Four Eye-spotted turtle which was a unique lineage in the four-eyed turtle and considered as an independent species S. insulensis recently. The full lengths of the S. bealei and S. quadriocellata mitogenomes are 16,564 bp, and 16,555 bp, respectively, while the length of partial mitochondrial genome of S. insulensis is 16,433 bp without tailed part of D-loop. All the genes exhibit the typical mitochondrial gene arrangement and transcribing directions of turtles. Phylogenetic analysis indicating that a deep divergence about 7.8% p distance was found between S. bealei and (S. quadriocellata + S. insulensis), and the divergence (2.8% in patristic distance) between S. quadriocellata and S. insulensis is comparable with other closely related species in turtles. |
format | Online Article Text |
id | pubmed-7782976 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77829762021-01-14 Characterization and comparison of mitogenomes of three ‘eyed’ turtles Sacalia spp Lin, Liu Chen, Huaiqing Wang, Zhao Gaillard, Daniel Zhai, Xiaofei Shi, Haitao Mitochondrial DNA B Resour MitoGenome Announcement In this paper, we characterized the mitogenomes of three ‘eyed’ turtles, the Beal’s Eyed turtle (Sacalia bealei), the Four Eye-spotted turtle (S. quadriocellata), and the Hainan Four Eye-spotted turtle which was a unique lineage in the four-eyed turtle and considered as an independent species S. insulensis recently. The full lengths of the S. bealei and S. quadriocellata mitogenomes are 16,564 bp, and 16,555 bp, respectively, while the length of partial mitochondrial genome of S. insulensis is 16,433 bp without tailed part of D-loop. All the genes exhibit the typical mitochondrial gene arrangement and transcribing directions of turtles. Phylogenetic analysis indicating that a deep divergence about 7.8% p distance was found between S. bealei and (S. quadriocellata + S. insulensis), and the divergence (2.8% in patristic distance) between S. quadriocellata and S. insulensis is comparable with other closely related species in turtles. Taylor & Francis 2020-08-26 /pmc/articles/PMC7782976/ /pubmed/33458106 http://dx.doi.org/10.1080/23802359.2020.1806750 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | MitoGenome Announcement Lin, Liu Chen, Huaiqing Wang, Zhao Gaillard, Daniel Zhai, Xiaofei Shi, Haitao Characterization and comparison of mitogenomes of three ‘eyed’ turtles Sacalia spp |
title | Characterization and comparison of mitogenomes of three ‘eyed’ turtles Sacalia spp |
title_full | Characterization and comparison of mitogenomes of three ‘eyed’ turtles Sacalia spp |
title_fullStr | Characterization and comparison of mitogenomes of three ‘eyed’ turtles Sacalia spp |
title_full_unstemmed | Characterization and comparison of mitogenomes of three ‘eyed’ turtles Sacalia spp |
title_short | Characterization and comparison of mitogenomes of three ‘eyed’ turtles Sacalia spp |
title_sort | characterization and comparison of mitogenomes of three ‘eyed’ turtles sacalia spp |
topic | MitoGenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782976/ https://www.ncbi.nlm.nih.gov/pubmed/33458106 http://dx.doi.org/10.1080/23802359.2020.1806750 |
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