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Characterization and comparison of mitogenomes of three ‘eyed’ turtles Sacalia spp

In this paper, we characterized the mitogenomes of three ‘eyed’ turtles, the Beal’s Eyed turtle (Sacalia bealei), the Four Eye-spotted turtle (S. quadriocellata), and the Hainan Four Eye-spotted turtle which was a unique lineage in the four-eyed turtle and considered as an independent species S. ins...

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Autores principales: Lin, Liu, Chen, Huaiqing, Wang, Zhao, Gaillard, Daniel, Zhai, Xiaofei, Shi, Haitao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782976/
https://www.ncbi.nlm.nih.gov/pubmed/33458106
http://dx.doi.org/10.1080/23802359.2020.1806750
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author Lin, Liu
Chen, Huaiqing
Wang, Zhao
Gaillard, Daniel
Zhai, Xiaofei
Shi, Haitao
author_facet Lin, Liu
Chen, Huaiqing
Wang, Zhao
Gaillard, Daniel
Zhai, Xiaofei
Shi, Haitao
author_sort Lin, Liu
collection PubMed
description In this paper, we characterized the mitogenomes of three ‘eyed’ turtles, the Beal’s Eyed turtle (Sacalia bealei), the Four Eye-spotted turtle (S. quadriocellata), and the Hainan Four Eye-spotted turtle which was a unique lineage in the four-eyed turtle and considered as an independent species S. insulensis recently. The full lengths of the S. bealei and S. quadriocellata mitogenomes are 16,564 bp, and 16,555 bp, respectively, while the length of partial mitochondrial genome of S. insulensis is 16,433 bp without tailed part of D-loop. All the genes exhibit the typical mitochondrial gene arrangement and transcribing directions of turtles. Phylogenetic analysis indicating that a deep divergence about 7.8% p distance was found between S. bealei and (S. quadriocellata + S. insulensis), and the divergence (2.8% in patristic distance) between S. quadriocellata and S. insulensis is comparable with other closely related species in turtles.
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spelling pubmed-77829762021-01-14 Characterization and comparison of mitogenomes of three ‘eyed’ turtles Sacalia spp Lin, Liu Chen, Huaiqing Wang, Zhao Gaillard, Daniel Zhai, Xiaofei Shi, Haitao Mitochondrial DNA B Resour MitoGenome Announcement In this paper, we characterized the mitogenomes of three ‘eyed’ turtles, the Beal’s Eyed turtle (Sacalia bealei), the Four Eye-spotted turtle (S. quadriocellata), and the Hainan Four Eye-spotted turtle which was a unique lineage in the four-eyed turtle and considered as an independent species S. insulensis recently. The full lengths of the S. bealei and S. quadriocellata mitogenomes are 16,564 bp, and 16,555 bp, respectively, while the length of partial mitochondrial genome of S. insulensis is 16,433 bp without tailed part of D-loop. All the genes exhibit the typical mitochondrial gene arrangement and transcribing directions of turtles. Phylogenetic analysis indicating that a deep divergence about 7.8% p distance was found between S. bealei and (S. quadriocellata + S. insulensis), and the divergence (2.8% in patristic distance) between S. quadriocellata and S. insulensis is comparable with other closely related species in turtles. Taylor & Francis 2020-08-26 /pmc/articles/PMC7782976/ /pubmed/33458106 http://dx.doi.org/10.1080/23802359.2020.1806750 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle MitoGenome Announcement
Lin, Liu
Chen, Huaiqing
Wang, Zhao
Gaillard, Daniel
Zhai, Xiaofei
Shi, Haitao
Characterization and comparison of mitogenomes of three ‘eyed’ turtles Sacalia spp
title Characterization and comparison of mitogenomes of three ‘eyed’ turtles Sacalia spp
title_full Characterization and comparison of mitogenomes of three ‘eyed’ turtles Sacalia spp
title_fullStr Characterization and comparison of mitogenomes of three ‘eyed’ turtles Sacalia spp
title_full_unstemmed Characterization and comparison of mitogenomes of three ‘eyed’ turtles Sacalia spp
title_short Characterization and comparison of mitogenomes of three ‘eyed’ turtles Sacalia spp
title_sort characterization and comparison of mitogenomes of three ‘eyed’ turtles sacalia spp
topic MitoGenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782976/
https://www.ncbi.nlm.nih.gov/pubmed/33458106
http://dx.doi.org/10.1080/23802359.2020.1806750
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