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Complete mitochondrial genomes provide current refined phylogenomic hypotheses for relationships among ten Hirundo species

Hirundo is the most species-rich genus of the passerine swallow family (Hirundinidae) and has a cosmopolitan distribution. Here we report the complete, annotated mitochondrial genomes for 25 individuals from 10 of the 14 extant Hirundo species; these include representatives from four subspecies of t...

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Autores principales: Carter, Javan K., Innes, Peter, Goebl, April M., Johnson, Benjamin, Gebert, Matthew, Attia, Ziv, Gabani, Zachariah, Li, Ruiqi, Melie, Tina, Dart, Chiara, Mares, Ali, Greidanus, Chrisopher, Paterson, Jaime, Wall, Brianna, Cortese, Gabriela, Thirouin, Kevin, Glime, Gabrielle, Rutten, Joseph, Poyd, Cameron, Post, Erin, Elhadi, Ahmed A., Feldmann, Katherine, Danz, August, Blanchard, Thomas, Amato, Samantha, Reinert, Stephan, Pogoda, Cloe S., Scordato, Elizabeth S. C., Hund, Amanda K., Safran, Rebecca J., Kane, Nolan C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7783031/
https://www.ncbi.nlm.nih.gov/pubmed/33457987
http://dx.doi.org/10.1080/23802359.2020.1790999
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author Carter, Javan K.
Innes, Peter
Goebl, April M.
Johnson, Benjamin
Gebert, Matthew
Attia, Ziv
Gabani, Zachariah
Li, Ruiqi
Melie, Tina
Dart, Chiara
Mares, Ali
Greidanus, Chrisopher
Paterson, Jaime
Wall, Brianna
Cortese, Gabriela
Thirouin, Kevin
Glime, Gabrielle
Rutten, Joseph
Poyd, Cameron
Post, Erin
Wall, Brianna
Elhadi, Ahmed A.
Feldmann, Katherine
Danz, August
Blanchard, Thomas
Amato, Samantha
Reinert, Stephan
Pogoda, Cloe S.
Scordato, Elizabeth S. C.
Hund, Amanda K.
Safran, Rebecca J.
Kane, Nolan C.
author_facet Carter, Javan K.
Innes, Peter
Goebl, April M.
Johnson, Benjamin
Gebert, Matthew
Attia, Ziv
Gabani, Zachariah
Li, Ruiqi
Melie, Tina
Dart, Chiara
Mares, Ali
Greidanus, Chrisopher
Paterson, Jaime
Wall, Brianna
Cortese, Gabriela
Thirouin, Kevin
Glime, Gabrielle
Rutten, Joseph
Poyd, Cameron
Post, Erin
Wall, Brianna
Elhadi, Ahmed A.
Feldmann, Katherine
Danz, August
Blanchard, Thomas
Amato, Samantha
Reinert, Stephan
Pogoda, Cloe S.
Scordato, Elizabeth S. C.
Hund, Amanda K.
Safran, Rebecca J.
Kane, Nolan C.
author_sort Carter, Javan K.
collection PubMed
description Hirundo is the most species-rich genus of the passerine swallow family (Hirundinidae) and has a cosmopolitan distribution. Here we report the complete, annotated mitochondrial genomes for 25 individuals from 10 of the 14 extant Hirundo species; these include representatives from four subspecies of the barn swallow, H. rustica. Mitogenomes were conserved in size, ranging from 18,500 to 18,700 base pairs. They all contained 13 protein-coding regions, 22 tRNAs, a control region, and large and small ribosomal subunits. Phylogenetic analysis resolved most of the relationships between the studied species and subspecies which were largely consistent with previously published trees. Several new relationships were observed within the phylogeny that could have only been discovered with the increased amount of genetic material. This study represents the largest Hirundo mitochondrial phylogeny to date, and could serve as a vital tool for other studies focusing on the evolution of the Hirundo genus.
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spelling pubmed-77830312021-01-14 Complete mitochondrial genomes provide current refined phylogenomic hypotheses for relationships among ten Hirundo species Carter, Javan K. Innes, Peter Goebl, April M. Johnson, Benjamin Gebert, Matthew Attia, Ziv Gabani, Zachariah Li, Ruiqi Melie, Tina Dart, Chiara Mares, Ali Greidanus, Chrisopher Paterson, Jaime Wall, Brianna Cortese, Gabriela Thirouin, Kevin Glime, Gabrielle Rutten, Joseph Poyd, Cameron Post, Erin Wall, Brianna Elhadi, Ahmed A. Feldmann, Katherine Danz, August Blanchard, Thomas Amato, Samantha Reinert, Stephan Pogoda, Cloe S. Scordato, Elizabeth S. C. Hund, Amanda K. Safran, Rebecca J. Kane, Nolan C. Mitochondrial DNA B Resour Rapid Communication Hirundo is the most species-rich genus of the passerine swallow family (Hirundinidae) and has a cosmopolitan distribution. Here we report the complete, annotated mitochondrial genomes for 25 individuals from 10 of the 14 extant Hirundo species; these include representatives from four subspecies of the barn swallow, H. rustica. Mitogenomes were conserved in size, ranging from 18,500 to 18,700 base pairs. They all contained 13 protein-coding regions, 22 tRNAs, a control region, and large and small ribosomal subunits. Phylogenetic analysis resolved most of the relationships between the studied species and subspecies which were largely consistent with previously published trees. Several new relationships were observed within the phylogeny that could have only been discovered with the increased amount of genetic material. This study represents the largest Hirundo mitochondrial phylogeny to date, and could serve as a vital tool for other studies focusing on the evolution of the Hirundo genus. Taylor & Francis 2020-07-20 /pmc/articles/PMC7783031/ /pubmed/33457987 http://dx.doi.org/10.1080/23802359.2020.1790999 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Rapid Communication
Carter, Javan K.
Innes, Peter
Goebl, April M.
Johnson, Benjamin
Gebert, Matthew
Attia, Ziv
Gabani, Zachariah
Li, Ruiqi
Melie, Tina
Dart, Chiara
Mares, Ali
Greidanus, Chrisopher
Paterson, Jaime
Wall, Brianna
Cortese, Gabriela
Thirouin, Kevin
Glime, Gabrielle
Rutten, Joseph
Poyd, Cameron
Post, Erin
Wall, Brianna
Elhadi, Ahmed A.
Feldmann, Katherine
Danz, August
Blanchard, Thomas
Amato, Samantha
Reinert, Stephan
Pogoda, Cloe S.
Scordato, Elizabeth S. C.
Hund, Amanda K.
Safran, Rebecca J.
Kane, Nolan C.
Complete mitochondrial genomes provide current refined phylogenomic hypotheses for relationships among ten Hirundo species
title Complete mitochondrial genomes provide current refined phylogenomic hypotheses for relationships among ten Hirundo species
title_full Complete mitochondrial genomes provide current refined phylogenomic hypotheses for relationships among ten Hirundo species
title_fullStr Complete mitochondrial genomes provide current refined phylogenomic hypotheses for relationships among ten Hirundo species
title_full_unstemmed Complete mitochondrial genomes provide current refined phylogenomic hypotheses for relationships among ten Hirundo species
title_short Complete mitochondrial genomes provide current refined phylogenomic hypotheses for relationships among ten Hirundo species
title_sort complete mitochondrial genomes provide current refined phylogenomic hypotheses for relationships among ten hirundo species
topic Rapid Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7783031/
https://www.ncbi.nlm.nih.gov/pubmed/33457987
http://dx.doi.org/10.1080/23802359.2020.1790999
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