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The complete chloroplast genome sequence of Stilpnolepis centiflora (Asteraceae), an endemic desert species in Northern China
Stilpnolepis centiflora, a monotypic genus of the Asteraceae, is an endemic desert species in Northern China. However, information on the chloroplast (cp) genome of this species is limited. In this study, we present the complete chloroplast genome sequence of S. centiflora obtained by high-throughpu...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2020
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7783050/ https://www.ncbi.nlm.nih.gov/pubmed/33458235 http://dx.doi.org/10.1080/23802359.2020.1829127 |
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author | Shi, Xiaojun Xie, Kaiqing |
author_facet | Shi, Xiaojun Xie, Kaiqing |
author_sort | Shi, Xiaojun |
collection | PubMed |
description | Stilpnolepis centiflora, a monotypic genus of the Asteraceae, is an endemic desert species in Northern China. However, information on the chloroplast (cp) genome of this species is limited. In this study, we present the complete chloroplast genome sequence of S. centiflora obtained by high-throughput nextgeneration sequencing technology. The whole cp genome was 151017 bp long and comprised 133 genes, including 88 proteincoding genes, 37 tRNA genes, and 8 rRNA genes. The S. centiflora cp genome had a GC content of 37.35%. Phylogenetic tree revealed that S. centiflora was closely related to the taxa in the genus Artemisia and Chrysanthemum. Our results would be helpful for species identification and promote our understanding of the phylogeny of Stilpnolepis within the Asteraceae family. |
format | Online Article Text |
id | pubmed-7783050 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77830502021-01-14 The complete chloroplast genome sequence of Stilpnolepis centiflora (Asteraceae), an endemic desert species in Northern China Shi, Xiaojun Xie, Kaiqing Mitochondrial DNA B Resour Mitogenome Announcement Stilpnolepis centiflora, a monotypic genus of the Asteraceae, is an endemic desert species in Northern China. However, information on the chloroplast (cp) genome of this species is limited. In this study, we present the complete chloroplast genome sequence of S. centiflora obtained by high-throughput nextgeneration sequencing technology. The whole cp genome was 151017 bp long and comprised 133 genes, including 88 proteincoding genes, 37 tRNA genes, and 8 rRNA genes. The S. centiflora cp genome had a GC content of 37.35%. Phylogenetic tree revealed that S. centiflora was closely related to the taxa in the genus Artemisia and Chrysanthemum. Our results would be helpful for species identification and promote our understanding of the phylogeny of Stilpnolepis within the Asteraceae family. Taylor & Francis 2020-10-09 /pmc/articles/PMC7783050/ /pubmed/33458235 http://dx.doi.org/10.1080/23802359.2020.1829127 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Shi, Xiaojun Xie, Kaiqing The complete chloroplast genome sequence of Stilpnolepis centiflora (Asteraceae), an endemic desert species in Northern China |
title | The complete chloroplast genome sequence of Stilpnolepis centiflora (Asteraceae), an endemic desert species in Northern China |
title_full | The complete chloroplast genome sequence of Stilpnolepis centiflora (Asteraceae), an endemic desert species in Northern China |
title_fullStr | The complete chloroplast genome sequence of Stilpnolepis centiflora (Asteraceae), an endemic desert species in Northern China |
title_full_unstemmed | The complete chloroplast genome sequence of Stilpnolepis centiflora (Asteraceae), an endemic desert species in Northern China |
title_short | The complete chloroplast genome sequence of Stilpnolepis centiflora (Asteraceae), an endemic desert species in Northern China |
title_sort | complete chloroplast genome sequence of stilpnolepis centiflora (asteraceae), an endemic desert species in northern china |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7783050/ https://www.ncbi.nlm.nih.gov/pubmed/33458235 http://dx.doi.org/10.1080/23802359.2020.1829127 |
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