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Plastome structure and phylogeny of Gnetum luofuense C.Y. Cheng (Gnetaceae, Gnetales)

This article describes the complete chloroplast genome of Gnetum luofuense. The G. luofense plastome was 114,795 bp in length, containing a large single copy region (66,103 bp) and a small single copy region (9438 bp), separated by two inverted repeat regions (19,627 bp). The genome lost all ndh gen...

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Autores principales: Chang, Aimee Caye G., Bautista, Mary Ann C., Zheng, Yan, Wan, Tao, Chen, Tao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7783052/
https://www.ncbi.nlm.nih.gov/pubmed/33458172
http://dx.doi.org/10.1080/23802359.2020.1821818
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author Chang, Aimee Caye G.
Bautista, Mary Ann C.
Zheng, Yan
Wan, Tao
Chen, Tao
author_facet Chang, Aimee Caye G.
Bautista, Mary Ann C.
Zheng, Yan
Wan, Tao
Chen, Tao
author_sort Chang, Aimee Caye G.
collection PubMed
description This article describes the complete chloroplast genome of Gnetum luofuense. The G. luofense plastome was 114,795 bp in length, containing a large single copy region (66,103 bp) and a small single copy region (9438 bp), separated by two inverted repeat regions (19,627 bp). The genome lost all ndh genes and contained 116 genes, including 68 protein-coding genes, 40 tRNA genes, and eight rRNA genes. The GC content was 33.3%, 12 genes all contained an intron, ycf3 gene contained two introns while rps12 was a transpliced gene. Phylogenetic analysis using 61 concatenated protein-coding genes suggests that G. luofuense with the rest of other gnetophytes were sister to or nested within all conifers.
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spelling pubmed-77830522021-01-14 Plastome structure and phylogeny of Gnetum luofuense C.Y. Cheng (Gnetaceae, Gnetales) Chang, Aimee Caye G. Bautista, Mary Ann C. Zheng, Yan Wan, Tao Chen, Tao Mitochondrial DNA B Resour Mitogenome Announcement This article describes the complete chloroplast genome of Gnetum luofuense. The G. luofense plastome was 114,795 bp in length, containing a large single copy region (66,103 bp) and a small single copy region (9438 bp), separated by two inverted repeat regions (19,627 bp). The genome lost all ndh genes and contained 116 genes, including 68 protein-coding genes, 40 tRNA genes, and eight rRNA genes. The GC content was 33.3%, 12 genes all contained an intron, ycf3 gene contained two introns while rps12 was a transpliced gene. Phylogenetic analysis using 61 concatenated protein-coding genes suggests that G. luofuense with the rest of other gnetophytes were sister to or nested within all conifers. Taylor & Francis 2020-09-18 /pmc/articles/PMC7783052/ /pubmed/33458172 http://dx.doi.org/10.1080/23802359.2020.1821818 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Chang, Aimee Caye G.
Bautista, Mary Ann C.
Zheng, Yan
Wan, Tao
Chen, Tao
Plastome structure and phylogeny of Gnetum luofuense C.Y. Cheng (Gnetaceae, Gnetales)
title Plastome structure and phylogeny of Gnetum luofuense C.Y. Cheng (Gnetaceae, Gnetales)
title_full Plastome structure and phylogeny of Gnetum luofuense C.Y. Cheng (Gnetaceae, Gnetales)
title_fullStr Plastome structure and phylogeny of Gnetum luofuense C.Y. Cheng (Gnetaceae, Gnetales)
title_full_unstemmed Plastome structure and phylogeny of Gnetum luofuense C.Y. Cheng (Gnetaceae, Gnetales)
title_short Plastome structure and phylogeny of Gnetum luofuense C.Y. Cheng (Gnetaceae, Gnetales)
title_sort plastome structure and phylogeny of gnetum luofuense c.y. cheng (gnetaceae, gnetales)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7783052/
https://www.ncbi.nlm.nih.gov/pubmed/33458172
http://dx.doi.org/10.1080/23802359.2020.1821818
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