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Character-based identification system of scombrids from Indian waters for authentication and conservation purposes
Scombrids are the important component of pelagic fishery resources which include 54 species under 15 genera commonly known as mackerels, bonitos, and tunas. Due to the high commercial value attained, there are real chances of fraudulent substitution by species of inferior value. DNA based species id...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7783091/ https://www.ncbi.nlm.nih.gov/pubmed/33458118 http://dx.doi.org/10.1080/23802359.2020.1810144 |
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author | Mahapatra, Sonalismita A., Rathipriya Dwivedy, Priyadarshini E., Suresh S. A., Shanmugam A., Kathivelpandian |
author_facet | Mahapatra, Sonalismita A., Rathipriya Dwivedy, Priyadarshini E., Suresh S. A., Shanmugam A., Kathivelpandian |
author_sort | Mahapatra, Sonalismita |
collection | PubMed |
description | Scombrids are the important component of pelagic fishery resources which include 54 species under 15 genera commonly known as mackerels, bonitos, and tunas. Due to the high commercial value attained, there are real chances of fraudulent substitution by species of inferior value. DNA based species identification methods can be applied to detect product adulteration, as well as to better contribute to the conservation and management of these species by providing accurate species identification independently of the age of the individuals or the tissue processed. In this study, a total of 15 commercially important scombrid species from Indian waters were analyzed. Due to the inadequacy of mitochondrial COI barcoding gene in discriminating between some Thunnus species, cytochrome b sequences were used instead. For all the 15 species, we propose a DNA character-based keys which uses a diagnostic combination of nucleotides and respective probes, including the first character-based keys and probes to differentiate between Thunnus albacares and T. obsesus. |
format | Online Article Text |
id | pubmed-7783091 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77830912021-01-14 Character-based identification system of scombrids from Indian waters for authentication and conservation purposes Mahapatra, Sonalismita A., Rathipriya Dwivedy, Priyadarshini E., Suresh S. A., Shanmugam A., Kathivelpandian Mitochondrial DNA B Resour Rapid Communication Scombrids are the important component of pelagic fishery resources which include 54 species under 15 genera commonly known as mackerels, bonitos, and tunas. Due to the high commercial value attained, there are real chances of fraudulent substitution by species of inferior value. DNA based species identification methods can be applied to detect product adulteration, as well as to better contribute to the conservation and management of these species by providing accurate species identification independently of the age of the individuals or the tissue processed. In this study, a total of 15 commercially important scombrid species from Indian waters were analyzed. Due to the inadequacy of mitochondrial COI barcoding gene in discriminating between some Thunnus species, cytochrome b sequences were used instead. For all the 15 species, we propose a DNA character-based keys which uses a diagnostic combination of nucleotides and respective probes, including the first character-based keys and probes to differentiate between Thunnus albacares and T. obsesus. Taylor & Francis 2020-08-26 /pmc/articles/PMC7783091/ /pubmed/33458118 http://dx.doi.org/10.1080/23802359.2020.1810144 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Rapid Communication Mahapatra, Sonalismita A., Rathipriya Dwivedy, Priyadarshini E., Suresh S. A., Shanmugam A., Kathivelpandian Character-based identification system of scombrids from Indian waters for authentication and conservation purposes |
title | Character-based identification system of scombrids from Indian waters for authentication and conservation purposes |
title_full | Character-based identification system of scombrids from Indian waters for authentication and conservation purposes |
title_fullStr | Character-based identification system of scombrids from Indian waters for authentication and conservation purposes |
title_full_unstemmed | Character-based identification system of scombrids from Indian waters for authentication and conservation purposes |
title_short | Character-based identification system of scombrids from Indian waters for authentication and conservation purposes |
title_sort | character-based identification system of scombrids from indian waters for authentication and conservation purposes |
topic | Rapid Communication |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7783091/ https://www.ncbi.nlm.nih.gov/pubmed/33458118 http://dx.doi.org/10.1080/23802359.2020.1810144 |
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