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The complete chloroplast genome sequence of Elaeocarpus braceanus: the first Celastraceae plastome
The first complete chloroplast genome (cpDNA) sequence of Elaeocarpus braceanus was determined from Illumina HiSeq pair-end sequencing data in this study. The cpDNA is 158,225 bp in length, contains a large single-copy region (LSC) of 85,731 bp and a small single-copy region (SSC) of 17,654 bp, whic...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2020
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7783116/ https://www.ncbi.nlm.nih.gov/pubmed/33457938 http://dx.doi.org/10.1080/23802359.2020.1788444 |
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author | Wang, Qinghua Su, Junwu Li, Yunqin Yuan, Xiaolong Zhou, Hong Wang, Yi |
author_facet | Wang, Qinghua Su, Junwu Li, Yunqin Yuan, Xiaolong Zhou, Hong Wang, Yi |
author_sort | Wang, Qinghua |
collection | PubMed |
description | The first complete chloroplast genome (cpDNA) sequence of Elaeocarpus braceanus was determined from Illumina HiSeq pair-end sequencing data in this study. The cpDNA is 158,225 bp in length, contains a large single-copy region (LSC) of 85,731 bp and a small single-copy region (SSC) of 17,654 bp, which were separated by a pair of inverted repeats (IR) regions of 27,420 bp. The genome contains 133 genes, including 88 protein-coding genes, 8 ribosomal RNA genes, and 37 transfer RNA genes. Further phylogenomic analysis showed that E. braceanus clustered in a clade in Celastrales order. |
format | Online Article Text |
id | pubmed-7783116 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77831162021-01-14 The complete chloroplast genome sequence of Elaeocarpus braceanus: the first Celastraceae plastome Wang, Qinghua Su, Junwu Li, Yunqin Yuan, Xiaolong Zhou, Hong Wang, Yi Mitochondrial DNA B Resour Mitogenome Announcement The first complete chloroplast genome (cpDNA) sequence of Elaeocarpus braceanus was determined from Illumina HiSeq pair-end sequencing data in this study. The cpDNA is 158,225 bp in length, contains a large single-copy region (LSC) of 85,731 bp and a small single-copy region (SSC) of 17,654 bp, which were separated by a pair of inverted repeats (IR) regions of 27,420 bp. The genome contains 133 genes, including 88 protein-coding genes, 8 ribosomal RNA genes, and 37 transfer RNA genes. Further phylogenomic analysis showed that E. braceanus clustered in a clade in Celastrales order. Taylor & Francis 2020-07-11 /pmc/articles/PMC7783116/ /pubmed/33457938 http://dx.doi.org/10.1080/23802359.2020.1788444 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Wang, Qinghua Su, Junwu Li, Yunqin Yuan, Xiaolong Zhou, Hong Wang, Yi The complete chloroplast genome sequence of Elaeocarpus braceanus: the first Celastraceae plastome |
title | The complete chloroplast genome sequence of Elaeocarpus braceanus: the first Celastraceae plastome |
title_full | The complete chloroplast genome sequence of Elaeocarpus braceanus: the first Celastraceae plastome |
title_fullStr | The complete chloroplast genome sequence of Elaeocarpus braceanus: the first Celastraceae plastome |
title_full_unstemmed | The complete chloroplast genome sequence of Elaeocarpus braceanus: the first Celastraceae plastome |
title_short | The complete chloroplast genome sequence of Elaeocarpus braceanus: the first Celastraceae plastome |
title_sort | complete chloroplast genome sequence of elaeocarpus braceanus: the first celastraceae plastome |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7783116/ https://www.ncbi.nlm.nih.gov/pubmed/33457938 http://dx.doi.org/10.1080/23802359.2020.1788444 |
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