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Complete chloroplast genome of Synsepalum dulcificum D.: a magical plant that modifies sour flavors to sweet
Synsepalum dulcificum D. belongs to the Sapotaceae family, which is an evergreen shrub native to tropical West Africa. It is a kind of magical plant that has the unique characteristic of modifying sour flavors to sweet. In this study, the chloroplast genome of S. dulcificum was sequenced, assembled,...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7783140/ https://www.ncbi.nlm.nih.gov/pubmed/33458055 http://dx.doi.org/10.1080/23802359.2020.1798299 |
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author | Niu, Ying-feng Ni, Shu-bang Liu, Jin |
author_facet | Niu, Ying-feng Ni, Shu-bang Liu, Jin |
author_sort | Niu, Ying-feng |
collection | PubMed |
description | Synsepalum dulcificum D. belongs to the Sapotaceae family, which is an evergreen shrub native to tropical West Africa. It is a kind of magical plant that has the unique characteristic of modifying sour flavors to sweet. In this study, the chloroplast genome of S. dulcificum was sequenced, assembled, and annotated firstly. Chloroplast genome size of S. dulcificum is 158,463 bp, the circular chloroplast genome consists of four regions: a large single-copy region of 88,256 bp, two inverted repeat regions of 25,958 bp, and a small single-copy region of 18,669 bp, with the GC content of 36.87%. A total of 133 genes were annotated in the S. dulcificum chloroplast genome, of which 88 were protein-coding genes (PCGs), 37 were transfer RNA (tRNA) genes, and eight were ribosomal RNA (rRNA) genes. Phylogenetic analysis showed that Pouteria campechiana was most closely related to S. dulcificum. The study provides important genomic data for further utilization and breeding of S. dulcificum. |
format | Online Article Text |
id | pubmed-7783140 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77831402021-01-14 Complete chloroplast genome of Synsepalum dulcificum D.: a magical plant that modifies sour flavors to sweet Niu, Ying-feng Ni, Shu-bang Liu, Jin Mitochondrial DNA B Resour Mitogenome Announcement Synsepalum dulcificum D. belongs to the Sapotaceae family, which is an evergreen shrub native to tropical West Africa. It is a kind of magical plant that has the unique characteristic of modifying sour flavors to sweet. In this study, the chloroplast genome of S. dulcificum was sequenced, assembled, and annotated firstly. Chloroplast genome size of S. dulcificum is 158,463 bp, the circular chloroplast genome consists of four regions: a large single-copy region of 88,256 bp, two inverted repeat regions of 25,958 bp, and a small single-copy region of 18,669 bp, with the GC content of 36.87%. A total of 133 genes were annotated in the S. dulcificum chloroplast genome, of which 88 were protein-coding genes (PCGs), 37 were transfer RNA (tRNA) genes, and eight were ribosomal RNA (rRNA) genes. Phylogenetic analysis showed that Pouteria campechiana was most closely related to S. dulcificum. The study provides important genomic data for further utilization and breeding of S. dulcificum. Taylor & Francis 2020-07-30 /pmc/articles/PMC7783140/ /pubmed/33458055 http://dx.doi.org/10.1080/23802359.2020.1798299 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Niu, Ying-feng Ni, Shu-bang Liu, Jin Complete chloroplast genome of Synsepalum dulcificum D.: a magical plant that modifies sour flavors to sweet |
title | Complete chloroplast genome of Synsepalum dulcificum D.: a magical plant that modifies sour flavors to sweet |
title_full | Complete chloroplast genome of Synsepalum dulcificum D.: a magical plant that modifies sour flavors to sweet |
title_fullStr | Complete chloroplast genome of Synsepalum dulcificum D.: a magical plant that modifies sour flavors to sweet |
title_full_unstemmed | Complete chloroplast genome of Synsepalum dulcificum D.: a magical plant that modifies sour flavors to sweet |
title_short | Complete chloroplast genome of Synsepalum dulcificum D.: a magical plant that modifies sour flavors to sweet |
title_sort | complete chloroplast genome of synsepalum dulcificum d.: a magical plant that modifies sour flavors to sweet |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7783140/ https://www.ncbi.nlm.nih.gov/pubmed/33458055 http://dx.doi.org/10.1080/23802359.2020.1798299 |
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