The complete chloroplast genome of Pholidota yunnanensis Rolfe (Orchidaceae: Coelogyninae)

In this study, the complete chloroplast genome of Pholidota yunnanensis is presented, which represents first complete plastid genome of the genus Pholidota in the subtribe Coelogyninae. The chloroplast genome size is 159,729 bp, including a GC content of 37.3% and 135 genes (89 protein-coding genes,...

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Autores principales: Wu, Qiu-Ping, Wang, Wan-Yao, Zhang, Guo-Qiang, Zeng, Song-Jun, Li, Lin, Liu, Zhong-Jian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7783148/
https://www.ncbi.nlm.nih.gov/pubmed/33457830
http://dx.doi.org/10.1080/23802359.2020.1720533
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author Wu, Qiu-Ping
Wang, Wan-Yao
Zhang, Guo-Qiang
Zeng, Song-Jun
Li, Lin
Liu, Zhong-Jian
author_facet Wu, Qiu-Ping
Wang, Wan-Yao
Zhang, Guo-Qiang
Zeng, Song-Jun
Li, Lin
Liu, Zhong-Jian
author_sort Wu, Qiu-Ping
collection PubMed
description In this study, the complete chloroplast genome of Pholidota yunnanensis is presented, which represents first complete plastid genome of the genus Pholidota in the subtribe Coelogyninae. The chloroplast genome size is 159,729 bp, including a GC content of 37.3% and 135 genes (89 protein-coding genes, 38 tRNA genes, 8 rRNA genes). The genome structure is typical quadripartite, consisting of a pair of inverted repeat regions (26,638 bp) separated by a large single-copy region (LSC, 87,610 bp) and a small single-copy region (SSC, 18,843 bp). Phylogenetic analysis among 15 species based on cp genomes recovered a well-supported phylogenetic tree and indicated a close relationship between Pholidota yunnanensis and Pleione bulbocodioides.
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spelling pubmed-77831482021-01-14 The complete chloroplast genome of Pholidota yunnanensis Rolfe (Orchidaceae: Coelogyninae) Wu, Qiu-Ping Wang, Wan-Yao Zhang, Guo-Qiang Zeng, Song-Jun Li, Lin Liu, Zhong-Jian Mitochondrial DNA B Resour Mitogenome Announcement In this study, the complete chloroplast genome of Pholidota yunnanensis is presented, which represents first complete plastid genome of the genus Pholidota in the subtribe Coelogyninae. The chloroplast genome size is 159,729 bp, including a GC content of 37.3% and 135 genes (89 protein-coding genes, 38 tRNA genes, 8 rRNA genes). The genome structure is typical quadripartite, consisting of a pair of inverted repeat regions (26,638 bp) separated by a large single-copy region (LSC, 87,610 bp) and a small single-copy region (SSC, 18,843 bp). Phylogenetic analysis among 15 species based on cp genomes recovered a well-supported phylogenetic tree and indicated a close relationship between Pholidota yunnanensis and Pleione bulbocodioides. Taylor & Francis 2020-06-16 /pmc/articles/PMC7783148/ /pubmed/33457830 http://dx.doi.org/10.1080/23802359.2020.1720533 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Wu, Qiu-Ping
Wang, Wan-Yao
Zhang, Guo-Qiang
Zeng, Song-Jun
Li, Lin
Liu, Zhong-Jian
The complete chloroplast genome of Pholidota yunnanensis Rolfe (Orchidaceae: Coelogyninae)
title The complete chloroplast genome of Pholidota yunnanensis Rolfe (Orchidaceae: Coelogyninae)
title_full The complete chloroplast genome of Pholidota yunnanensis Rolfe (Orchidaceae: Coelogyninae)
title_fullStr The complete chloroplast genome of Pholidota yunnanensis Rolfe (Orchidaceae: Coelogyninae)
title_full_unstemmed The complete chloroplast genome of Pholidota yunnanensis Rolfe (Orchidaceae: Coelogyninae)
title_short The complete chloroplast genome of Pholidota yunnanensis Rolfe (Orchidaceae: Coelogyninae)
title_sort complete chloroplast genome of pholidota yunnanensis rolfe (orchidaceae: coelogyninae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7783148/
https://www.ncbi.nlm.nih.gov/pubmed/33457830
http://dx.doi.org/10.1080/23802359.2020.1720533
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