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Crystal structure, Hirshfeld surface analysis, DFT and mol­ecular docking investigation of 2-(2-oxo-1,3-oxazolidin-3-yl)ethyl 2-[2-(2-oxo-1,3-oxazolidin-3-yl)eth­oxy]quinoline-4-carboxyl­ate

In the mol­ecular structure of the title compound, C(20)H(21)N(3)O(7), the quinoline ring system is slightly bent, with a dihedral angle between the phenyl and the pyridine rings of 3.47 (7)°. In the crystal, corrugated layers of mol­ecules extending along the ab plane are generated by C—H⋯O hydroge...

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Autores principales: Bouzian, Younos, Baydere, Cemile, Dege, Necmi, Ahabchane, Noureddine Hamou, Mague, Joel T., Abudunia, Abdulmalik, Karrouchi, Khalid, Essassi, El Mokhtar
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7784058/
https://www.ncbi.nlm.nih.gov/pubmed/33520278
http://dx.doi.org/10.1107/S2056989020015960
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author Bouzian, Younos
Baydere, Cemile
Dege, Necmi
Ahabchane, Noureddine Hamou
Mague, Joel T.
Abudunia, Abdulmalik
Karrouchi, Khalid
Essassi, El Mokhtar
author_facet Bouzian, Younos
Baydere, Cemile
Dege, Necmi
Ahabchane, Noureddine Hamou
Mague, Joel T.
Abudunia, Abdulmalik
Karrouchi, Khalid
Essassi, El Mokhtar
author_sort Bouzian, Younos
collection PubMed
description In the mol­ecular structure of the title compound, C(20)H(21)N(3)O(7), the quinoline ring system is slightly bent, with a dihedral angle between the phenyl and the pyridine rings of 3.47 (7)°. In the crystal, corrugated layers of mol­ecules extending along the ab plane are generated by C—H⋯O hydrogen bonds. The inter­molecular inter­actions were qu­anti­fied by Hirshfeld surface analysis and two-dimensional fingerprint plots. The most significant contributions to the crystal packing are from H⋯H (42.3%), H⋯O/O⋯H (34.5%) and H⋯C/ C⋯H (17.6%) contacts. Mol­ecular orbital calculations providing electron-density plots of the HOMO and LUMO as well as mol­ecular electrostatic potentials (MEP) were computed, both with the DFT/B3LYP/6–311 G++(d,p) basis set. A mol­ecular docking study between the title mol­ecule and the COVID-19 main protease (PDB ID: 6LU7) was performed, showing that it is a good agent because of its affinity and ability to adhere to the active sites of the protein.
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spelling pubmed-77840582021-01-29 Crystal structure, Hirshfeld surface analysis, DFT and mol­ecular docking investigation of 2-(2-oxo-1,3-oxazolidin-3-yl)ethyl 2-[2-(2-oxo-1,3-oxazolidin-3-yl)eth­oxy]quinoline-4-carboxyl­ate Bouzian, Younos Baydere, Cemile Dege, Necmi Ahabchane, Noureddine Hamou Mague, Joel T. Abudunia, Abdulmalik Karrouchi, Khalid Essassi, El Mokhtar Acta Crystallogr E Crystallogr Commun Research Communications In the mol­ecular structure of the title compound, C(20)H(21)N(3)O(7), the quinoline ring system is slightly bent, with a dihedral angle between the phenyl and the pyridine rings of 3.47 (7)°. In the crystal, corrugated layers of mol­ecules extending along the ab plane are generated by C—H⋯O hydrogen bonds. The inter­molecular inter­actions were qu­anti­fied by Hirshfeld surface analysis and two-dimensional fingerprint plots. The most significant contributions to the crystal packing are from H⋯H (42.3%), H⋯O/O⋯H (34.5%) and H⋯C/ C⋯H (17.6%) contacts. Mol­ecular orbital calculations providing electron-density plots of the HOMO and LUMO as well as mol­ecular electrostatic potentials (MEP) were computed, both with the DFT/B3LYP/6–311 G++(d,p) basis set. A mol­ecular docking study between the title mol­ecule and the COVID-19 main protease (PDB ID: 6LU7) was performed, showing that it is a good agent because of its affinity and ability to adhere to the active sites of the protein. International Union of Crystallography 2021-01-01 /pmc/articles/PMC7784058/ /pubmed/33520278 http://dx.doi.org/10.1107/S2056989020015960 Text en © Bouzian et al. 2021 http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Research Communications
Bouzian, Younos
Baydere, Cemile
Dege, Necmi
Ahabchane, Noureddine Hamou
Mague, Joel T.
Abudunia, Abdulmalik
Karrouchi, Khalid
Essassi, El Mokhtar
Crystal structure, Hirshfeld surface analysis, DFT and mol­ecular docking investigation of 2-(2-oxo-1,3-oxazolidin-3-yl)ethyl 2-[2-(2-oxo-1,3-oxazolidin-3-yl)eth­oxy]quinoline-4-carboxyl­ate
title Crystal structure, Hirshfeld surface analysis, DFT and mol­ecular docking investigation of 2-(2-oxo-1,3-oxazolidin-3-yl)ethyl 2-[2-(2-oxo-1,3-oxazolidin-3-yl)eth­oxy]quinoline-4-carboxyl­ate
title_full Crystal structure, Hirshfeld surface analysis, DFT and mol­ecular docking investigation of 2-(2-oxo-1,3-oxazolidin-3-yl)ethyl 2-[2-(2-oxo-1,3-oxazolidin-3-yl)eth­oxy]quinoline-4-carboxyl­ate
title_fullStr Crystal structure, Hirshfeld surface analysis, DFT and mol­ecular docking investigation of 2-(2-oxo-1,3-oxazolidin-3-yl)ethyl 2-[2-(2-oxo-1,3-oxazolidin-3-yl)eth­oxy]quinoline-4-carboxyl­ate
title_full_unstemmed Crystal structure, Hirshfeld surface analysis, DFT and mol­ecular docking investigation of 2-(2-oxo-1,3-oxazolidin-3-yl)ethyl 2-[2-(2-oxo-1,3-oxazolidin-3-yl)eth­oxy]quinoline-4-carboxyl­ate
title_short Crystal structure, Hirshfeld surface analysis, DFT and mol­ecular docking investigation of 2-(2-oxo-1,3-oxazolidin-3-yl)ethyl 2-[2-(2-oxo-1,3-oxazolidin-3-yl)eth­oxy]quinoline-4-carboxyl­ate
title_sort crystal structure, hirshfeld surface analysis, dft and mol­ecular docking investigation of 2-(2-oxo-1,3-oxazolidin-3-yl)ethyl 2-[2-(2-oxo-1,3-oxazolidin-3-yl)eth­oxy]quinoline-4-carboxyl­ate
topic Research Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7784058/
https://www.ncbi.nlm.nih.gov/pubmed/33520278
http://dx.doi.org/10.1107/S2056989020015960
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