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Pushing the limits of solubility prediction via quality-oriented data selection
Accurate prediction of the solubility of chemical substances in solvents remains a challenge. The sparsity of high-quality solubility data is recognized as the biggest hurdle in the development of robust data-driven methods for practical use. Nonetheless, the effects of the quality and quantity of d...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7788089/ https://www.ncbi.nlm.nih.gov/pubmed/33437941 http://dx.doi.org/10.1016/j.isci.2020.101961 |
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author | Sorkun, Murat Cihan Koelman, J.M. Vianney A. Er, Süleyman |
author_facet | Sorkun, Murat Cihan Koelman, J.M. Vianney A. Er, Süleyman |
author_sort | Sorkun, Murat Cihan |
collection | PubMed |
description | Accurate prediction of the solubility of chemical substances in solvents remains a challenge. The sparsity of high-quality solubility data is recognized as the biggest hurdle in the development of robust data-driven methods for practical use. Nonetheless, the effects of the quality and quantity of data on aqueous solubility predictions have not yet been scrutinized. In this study, the roles of the size and the quality of data sets on the performances of the solubility prediction models are unraveled, and the concepts of actual and observed performances are introduced. In an effort to curtail the gap between actual and observed performances, a quality-oriented data selection method, which evaluates the quality of data and extracts the most accurate part of it through statistical validation, is designed. Applying this method on the largest publicly available solubility database and using a consensus machine learning approach, a top-performing solubility prediction model is achieved. |
format | Online Article Text |
id | pubmed-7788089 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-77880892021-01-11 Pushing the limits of solubility prediction via quality-oriented data selection Sorkun, Murat Cihan Koelman, J.M. Vianney A. Er, Süleyman iScience Article Accurate prediction of the solubility of chemical substances in solvents remains a challenge. The sparsity of high-quality solubility data is recognized as the biggest hurdle in the development of robust data-driven methods for practical use. Nonetheless, the effects of the quality and quantity of data on aqueous solubility predictions have not yet been scrutinized. In this study, the roles of the size and the quality of data sets on the performances of the solubility prediction models are unraveled, and the concepts of actual and observed performances are introduced. In an effort to curtail the gap between actual and observed performances, a quality-oriented data selection method, which evaluates the quality of data and extracts the most accurate part of it through statistical validation, is designed. Applying this method on the largest publicly available solubility database and using a consensus machine learning approach, a top-performing solubility prediction model is achieved. Elsevier 2020-12-17 /pmc/articles/PMC7788089/ /pubmed/33437941 http://dx.doi.org/10.1016/j.isci.2020.101961 Text en © 2020 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Sorkun, Murat Cihan Koelman, J.M. Vianney A. Er, Süleyman Pushing the limits of solubility prediction via quality-oriented data selection |
title | Pushing the limits of solubility prediction via quality-oriented data selection |
title_full | Pushing the limits of solubility prediction via quality-oriented data selection |
title_fullStr | Pushing the limits of solubility prediction via quality-oriented data selection |
title_full_unstemmed | Pushing the limits of solubility prediction via quality-oriented data selection |
title_short | Pushing the limits of solubility prediction via quality-oriented data selection |
title_sort | pushing the limits of solubility prediction via quality-oriented data selection |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7788089/ https://www.ncbi.nlm.nih.gov/pubmed/33437941 http://dx.doi.org/10.1016/j.isci.2020.101961 |
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