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Label-free proteomic analysis of serum exosomes from paroxysmal atrial fibrillation patients
BACKGROUND: Atrial fibrillation (AF) is the most common cardiac heterogeneous rhythm disorder. It represents a major cause of mortality and morbidity, mainly related to embolic events and heart failure. Mechanisms of AF are complex and remain incompletely understood. Recent evidence suggests exosome...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7789314/ https://www.ncbi.nlm.nih.gov/pubmed/33407078 http://dx.doi.org/10.1186/s12014-020-09304-8 |
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author | Ni, Hanwen Pan, Wenqi Jin, Qi Xie, Yucai Zhang, Ning Chen, Kang Lin, Tianyou Lin, Changjian Xie, Yun Wu, Jiemin Ni, Peihua Wu, Liqun |
author_facet | Ni, Hanwen Pan, Wenqi Jin, Qi Xie, Yucai Zhang, Ning Chen, Kang Lin, Tianyou Lin, Changjian Xie, Yun Wu, Jiemin Ni, Peihua Wu, Liqun |
author_sort | Ni, Hanwen |
collection | PubMed |
description | BACKGROUND: Atrial fibrillation (AF) is the most common cardiac heterogeneous rhythm disorder. It represents a major cause of mortality and morbidity, mainly related to embolic events and heart failure. Mechanisms of AF are complex and remain incompletely understood. Recent evidence suggests exosomes are membrane-coated objects released by many cell-types. Their presence in body fluids and the variable surface composition and content render them attractive as a mechanism for potential biomarkers. However, the content of serum exosomes of AF patients has not been fully delineated. METHODS: In this work, the serum exosomes from AF patients and healthy donors were used to compare changes in the exosome protein content. Exosomes were isolated from serum of AF patients and healthy donors and their purity was confirmed by Western blotting assays and transmission electron microscopy (TEM). Label-free LC–MS/MS quantitative proteomic analysis was applied to analyze protein content of serum exosomes. RESULTS: A total of 440 exosomal protein groups were identified, differentially expressed proteins were filtrated with fold change ≥ 2.0 (AF/controls protein abundance ratio ≥ 2 or ≤ 0.5) and p value less than 0.05 (p < 0.05), significantly changed in abundance group contains 39 elevated proteins and 18 reduced proteins, while consistent presence/absence expression profile group contains 40 elevated proteins and 75 reduced proteins. Bioinformatic analysis of differential exosomal proteins confirmed the significant enrichment of components involved in the anticoagulation, complement system and protein folding. Parallel-Reaction Monitoring Relative Quantitative Analysis (PRM) further suggested that AF related to complement system and protein folding. CONCLUSIONS: These results revealed the composition and potential function of AF serum exosomes, thus providing a new perspective on the complement system and protein folding to AF. |
format | Online Article Text |
id | pubmed-7789314 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-77893142021-01-07 Label-free proteomic analysis of serum exosomes from paroxysmal atrial fibrillation patients Ni, Hanwen Pan, Wenqi Jin, Qi Xie, Yucai Zhang, Ning Chen, Kang Lin, Tianyou Lin, Changjian Xie, Yun Wu, Jiemin Ni, Peihua Wu, Liqun Clin Proteomics Research BACKGROUND: Atrial fibrillation (AF) is the most common cardiac heterogeneous rhythm disorder. It represents a major cause of mortality and morbidity, mainly related to embolic events and heart failure. Mechanisms of AF are complex and remain incompletely understood. Recent evidence suggests exosomes are membrane-coated objects released by many cell-types. Their presence in body fluids and the variable surface composition and content render them attractive as a mechanism for potential biomarkers. However, the content of serum exosomes of AF patients has not been fully delineated. METHODS: In this work, the serum exosomes from AF patients and healthy donors were used to compare changes in the exosome protein content. Exosomes were isolated from serum of AF patients and healthy donors and their purity was confirmed by Western blotting assays and transmission electron microscopy (TEM). Label-free LC–MS/MS quantitative proteomic analysis was applied to analyze protein content of serum exosomes. RESULTS: A total of 440 exosomal protein groups were identified, differentially expressed proteins were filtrated with fold change ≥ 2.0 (AF/controls protein abundance ratio ≥ 2 or ≤ 0.5) and p value less than 0.05 (p < 0.05), significantly changed in abundance group contains 39 elevated proteins and 18 reduced proteins, while consistent presence/absence expression profile group contains 40 elevated proteins and 75 reduced proteins. Bioinformatic analysis of differential exosomal proteins confirmed the significant enrichment of components involved in the anticoagulation, complement system and protein folding. Parallel-Reaction Monitoring Relative Quantitative Analysis (PRM) further suggested that AF related to complement system and protein folding. CONCLUSIONS: These results revealed the composition and potential function of AF serum exosomes, thus providing a new perspective on the complement system and protein folding to AF. BioMed Central 2021-01-06 /pmc/articles/PMC7789314/ /pubmed/33407078 http://dx.doi.org/10.1186/s12014-020-09304-8 Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Ni, Hanwen Pan, Wenqi Jin, Qi Xie, Yucai Zhang, Ning Chen, Kang Lin, Tianyou Lin, Changjian Xie, Yun Wu, Jiemin Ni, Peihua Wu, Liqun Label-free proteomic analysis of serum exosomes from paroxysmal atrial fibrillation patients |
title | Label-free proteomic analysis of serum exosomes from paroxysmal atrial fibrillation patients |
title_full | Label-free proteomic analysis of serum exosomes from paroxysmal atrial fibrillation patients |
title_fullStr | Label-free proteomic analysis of serum exosomes from paroxysmal atrial fibrillation patients |
title_full_unstemmed | Label-free proteomic analysis of serum exosomes from paroxysmal atrial fibrillation patients |
title_short | Label-free proteomic analysis of serum exosomes from paroxysmal atrial fibrillation patients |
title_sort | label-free proteomic analysis of serum exosomes from paroxysmal atrial fibrillation patients |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7789314/ https://www.ncbi.nlm.nih.gov/pubmed/33407078 http://dx.doi.org/10.1186/s12014-020-09304-8 |
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