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HGFDB: a collective database of helmeted guinea fowl genomics
As a vigorous and hardy and an almost disease-free game bird, the domestic helmeted guinea fowl (Numida meleagris, hereafter HGF) has attracted considerable attention in a large number of genetic study projects. However, none of the current/recent avian databases are related to this agriculturally a...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7792568/ https://www.ncbi.nlm.nih.gov/pubmed/33417691 http://dx.doi.org/10.1093/database/baaa116 |
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author | Li, Xuzhen Li, Zhi Shen, Quankuan Pan, Yunbin Dong, Xiao Xu, Zetan Duan, Shengchang Li, Yunfei Du, Yuan Chen, Shanshan Ma, Zhaocheng Dong, Yang |
author_facet | Li, Xuzhen Li, Zhi Shen, Quankuan Pan, Yunbin Dong, Xiao Xu, Zetan Duan, Shengchang Li, Yunfei Du, Yuan Chen, Shanshan Ma, Zhaocheng Dong, Yang |
author_sort | Li, Xuzhen |
collection | PubMed |
description | As a vigorous and hardy and an almost disease-free game bird, the domestic helmeted guinea fowl (Numida meleagris, hereafter HGF) has attracted considerable attention in a large number of genetic study projects. However, none of the current/recent avian databases are related to this agriculturally and commercially important poultry species. To address this data gap, we developed Helmeted Guinea Fowl Database (HGFDB), which manages and shares HGF genomic and genetic data. By processing the data of genome assembly, sequencing reads and genetic variations, we organized them into eight modules, which correspond to ‘Home’, ‘Genome’, ‘Re-sequence’, ‘Gene’, ‘Variation’, ‘Download’, ‘Tools’ and ‘Help’, HGFDB provides the most comprehensive view of the HGF genome to date and will be relevant for future studies on HGF structural and functional genomics and genetic improvement. Database URL: http://hgfdb.ynau.edu.cn/ |
format | Online Article Text |
id | pubmed-7792568 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-77925682021-01-12 HGFDB: a collective database of helmeted guinea fowl genomics Li, Xuzhen Li, Zhi Shen, Quankuan Pan, Yunbin Dong, Xiao Xu, Zetan Duan, Shengchang Li, Yunfei Du, Yuan Chen, Shanshan Ma, Zhaocheng Dong, Yang Database (Oxford) Original Article As a vigorous and hardy and an almost disease-free game bird, the domestic helmeted guinea fowl (Numida meleagris, hereafter HGF) has attracted considerable attention in a large number of genetic study projects. However, none of the current/recent avian databases are related to this agriculturally and commercially important poultry species. To address this data gap, we developed Helmeted Guinea Fowl Database (HGFDB), which manages and shares HGF genomic and genetic data. By processing the data of genome assembly, sequencing reads and genetic variations, we organized them into eight modules, which correspond to ‘Home’, ‘Genome’, ‘Re-sequence’, ‘Gene’, ‘Variation’, ‘Download’, ‘Tools’ and ‘Help’, HGFDB provides the most comprehensive view of the HGF genome to date and will be relevant for future studies on HGF structural and functional genomics and genetic improvement. Database URL: http://hgfdb.ynau.edu.cn/ Oxford University Press 2021-01-08 /pmc/articles/PMC7792568/ /pubmed/33417691 http://dx.doi.org/10.1093/database/baaa116 Text en © The Author(s) 2021. Published by Oxford University Press. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Li, Xuzhen Li, Zhi Shen, Quankuan Pan, Yunbin Dong, Xiao Xu, Zetan Duan, Shengchang Li, Yunfei Du, Yuan Chen, Shanshan Ma, Zhaocheng Dong, Yang HGFDB: a collective database of helmeted guinea fowl genomics |
title | HGFDB: a collective database of helmeted guinea fowl genomics |
title_full | HGFDB: a collective database of helmeted guinea fowl genomics |
title_fullStr | HGFDB: a collective database of helmeted guinea fowl genomics |
title_full_unstemmed | HGFDB: a collective database of helmeted guinea fowl genomics |
title_short | HGFDB: a collective database of helmeted guinea fowl genomics |
title_sort | hgfdb: a collective database of helmeted guinea fowl genomics |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7792568/ https://www.ncbi.nlm.nih.gov/pubmed/33417691 http://dx.doi.org/10.1093/database/baaa116 |
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