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Automatic clustering method to segment COVID-19 CT images

Coronavirus pandemic (COVID-19) has infected more than ten million persons worldwide. Therefore, researchers are trying to address various aspects that may help in diagnosis this pneumonia. Image segmentation is a necessary pr-processing step that implemented in image analysis and classification app...

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Autores principales: Abd Elaziz, Mohamed, A. A. Al-qaness, Mohammed, Abo Zaid, Esraa Osama, Lu, Songfeng, Ali Ibrahim, Rehab, A. Ewees, Ahmed
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7793265/
https://www.ncbi.nlm.nih.gov/pubmed/33417610
http://dx.doi.org/10.1371/journal.pone.0244416
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author Abd Elaziz, Mohamed
A. A. Al-qaness, Mohammed
Abo Zaid, Esraa Osama
Lu, Songfeng
Ali Ibrahim, Rehab
A. Ewees, Ahmed
author_facet Abd Elaziz, Mohamed
A. A. Al-qaness, Mohammed
Abo Zaid, Esraa Osama
Lu, Songfeng
Ali Ibrahim, Rehab
A. Ewees, Ahmed
author_sort Abd Elaziz, Mohamed
collection PubMed
description Coronavirus pandemic (COVID-19) has infected more than ten million persons worldwide. Therefore, researchers are trying to address various aspects that may help in diagnosis this pneumonia. Image segmentation is a necessary pr-processing step that implemented in image analysis and classification applications. Therefore, in this study, our goal is to present an efficient image segmentation method for COVID-19 Computed Tomography (CT) images. The proposed image segmentation method depends on improving the density peaks clustering (DPC) using generalized extreme value (GEV) distribution. The DPC is faster than other clustering methods, and it provides more stable results. However, it is difficult to determine the optimal number of clustering centers automatically without visualization. So, GEV is used to determine the suitable threshold value to find the optimal number of clustering centers that lead to improving the segmentation process. The proposed model is applied for a set of twelve COVID-19 CT images. Also, it was compared with traditional k-means and DPC algorithms, and it has better performance using several measures, such as PSNR, SSIM, and Entropy.
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spelling pubmed-77932652021-01-27 Automatic clustering method to segment COVID-19 CT images Abd Elaziz, Mohamed A. A. Al-qaness, Mohammed Abo Zaid, Esraa Osama Lu, Songfeng Ali Ibrahim, Rehab A. Ewees, Ahmed PLoS One Research Article Coronavirus pandemic (COVID-19) has infected more than ten million persons worldwide. Therefore, researchers are trying to address various aspects that may help in diagnosis this pneumonia. Image segmentation is a necessary pr-processing step that implemented in image analysis and classification applications. Therefore, in this study, our goal is to present an efficient image segmentation method for COVID-19 Computed Tomography (CT) images. The proposed image segmentation method depends on improving the density peaks clustering (DPC) using generalized extreme value (GEV) distribution. The DPC is faster than other clustering methods, and it provides more stable results. However, it is difficult to determine the optimal number of clustering centers automatically without visualization. So, GEV is used to determine the suitable threshold value to find the optimal number of clustering centers that lead to improving the segmentation process. The proposed model is applied for a set of twelve COVID-19 CT images. Also, it was compared with traditional k-means and DPC algorithms, and it has better performance using several measures, such as PSNR, SSIM, and Entropy. Public Library of Science 2021-01-08 /pmc/articles/PMC7793265/ /pubmed/33417610 http://dx.doi.org/10.1371/journal.pone.0244416 Text en © 2021 Abd Elaziz et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Abd Elaziz, Mohamed
A. A. Al-qaness, Mohammed
Abo Zaid, Esraa Osama
Lu, Songfeng
Ali Ibrahim, Rehab
A. Ewees, Ahmed
Automatic clustering method to segment COVID-19 CT images
title Automatic clustering method to segment COVID-19 CT images
title_full Automatic clustering method to segment COVID-19 CT images
title_fullStr Automatic clustering method to segment COVID-19 CT images
title_full_unstemmed Automatic clustering method to segment COVID-19 CT images
title_short Automatic clustering method to segment COVID-19 CT images
title_sort automatic clustering method to segment covid-19 ct images
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7793265/
https://www.ncbi.nlm.nih.gov/pubmed/33417610
http://dx.doi.org/10.1371/journal.pone.0244416
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