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Genome-Wide Analysis of the GRAS Gene Family and Functional Identification of GmGRAS37 in Drought and Salt Tolerance
GRAS genes, which form a plant-specific transcription factor family, play an important role in plant growth and development and stress responses. However, the functions of GRAS genes in soybean (Glycine max) remain largely unknown. Here, 117 GRAS genes distributed on 20 chromosomes were identified i...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2020
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7793673/ https://www.ncbi.nlm.nih.gov/pubmed/33424904 http://dx.doi.org/10.3389/fpls.2020.604690 |
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author | Wang, Ting-Ting Yu, Tai-Fei Fu, Jin-Dong Su, Hong-Gang Chen, Jun Zhou, Yong-Bin Chen, Ming Guo, Jun Ma, You-Zhi Wei, Wen-Liang Xu, Zhao-Shi |
author_facet | Wang, Ting-Ting Yu, Tai-Fei Fu, Jin-Dong Su, Hong-Gang Chen, Jun Zhou, Yong-Bin Chen, Ming Guo, Jun Ma, You-Zhi Wei, Wen-Liang Xu, Zhao-Shi |
author_sort | Wang, Ting-Ting |
collection | PubMed |
description | GRAS genes, which form a plant-specific transcription factor family, play an important role in plant growth and development and stress responses. However, the functions of GRAS genes in soybean (Glycine max) remain largely unknown. Here, 117 GRAS genes distributed on 20 chromosomes were identified in the soybean genome and were classified into 11 subfamilies. Of the soybean GRAS genes, 80.34% did not have intron insertions, and 54 pairs of genes accounted for 88.52% of duplication events (61 pairs). RNA-seq analysis demonstrated that most GmGRASs were expressed in 14 different soybean tissues examined and responded to multiple abiotic stresses. Results from quantitative real-time PCR analysis of six selected GmGRASs suggested that GmGRAS37 was significantly upregulated under drought and salt stress conditions and abscisic acid and brassinosteroid treatment; therefore, this gene was selected for further study. Subcellular localization analysis revealed that the GmGRAS37 protein was located in the plasma membrane, nucleus, and cytosol. Soybean hairy roots overexpressing GmGRAS37 had improved resistance to drought and salt stresses. In addition, these roots showed increased transcript levels of several drought‐ and salt-related genes. The results of this study provide the basis for comprehensive analysis of GRAS genes and insight into the abiotic stress response mechanism in soybean. |
format | Online Article Text |
id | pubmed-7793673 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-77936732021-01-09 Genome-Wide Analysis of the GRAS Gene Family and Functional Identification of GmGRAS37 in Drought and Salt Tolerance Wang, Ting-Ting Yu, Tai-Fei Fu, Jin-Dong Su, Hong-Gang Chen, Jun Zhou, Yong-Bin Chen, Ming Guo, Jun Ma, You-Zhi Wei, Wen-Liang Xu, Zhao-Shi Front Plant Sci Plant Science GRAS genes, which form a plant-specific transcription factor family, play an important role in plant growth and development and stress responses. However, the functions of GRAS genes in soybean (Glycine max) remain largely unknown. Here, 117 GRAS genes distributed on 20 chromosomes were identified in the soybean genome and were classified into 11 subfamilies. Of the soybean GRAS genes, 80.34% did not have intron insertions, and 54 pairs of genes accounted for 88.52% of duplication events (61 pairs). RNA-seq analysis demonstrated that most GmGRASs were expressed in 14 different soybean tissues examined and responded to multiple abiotic stresses. Results from quantitative real-time PCR analysis of six selected GmGRASs suggested that GmGRAS37 was significantly upregulated under drought and salt stress conditions and abscisic acid and brassinosteroid treatment; therefore, this gene was selected for further study. Subcellular localization analysis revealed that the GmGRAS37 protein was located in the plasma membrane, nucleus, and cytosol. Soybean hairy roots overexpressing GmGRAS37 had improved resistance to drought and salt stresses. In addition, these roots showed increased transcript levels of several drought‐ and salt-related genes. The results of this study provide the basis for comprehensive analysis of GRAS genes and insight into the abiotic stress response mechanism in soybean. Frontiers Media S.A. 2020-12-23 /pmc/articles/PMC7793673/ /pubmed/33424904 http://dx.doi.org/10.3389/fpls.2020.604690 Text en Copyright © 2020 Wang, Yu, Fu, Su, Chen, Zhou, Chen, Guo, Ma, Wei and Xu. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Plant Science Wang, Ting-Ting Yu, Tai-Fei Fu, Jin-Dong Su, Hong-Gang Chen, Jun Zhou, Yong-Bin Chen, Ming Guo, Jun Ma, You-Zhi Wei, Wen-Liang Xu, Zhao-Shi Genome-Wide Analysis of the GRAS Gene Family and Functional Identification of GmGRAS37 in Drought and Salt Tolerance |
title | Genome-Wide Analysis of the GRAS Gene Family and Functional Identification of GmGRAS37 in Drought and Salt Tolerance |
title_full | Genome-Wide Analysis of the GRAS Gene Family and Functional Identification of GmGRAS37 in Drought and Salt Tolerance |
title_fullStr | Genome-Wide Analysis of the GRAS Gene Family and Functional Identification of GmGRAS37 in Drought and Salt Tolerance |
title_full_unstemmed | Genome-Wide Analysis of the GRAS Gene Family and Functional Identification of GmGRAS37 in Drought and Salt Tolerance |
title_short | Genome-Wide Analysis of the GRAS Gene Family and Functional Identification of GmGRAS37 in Drought and Salt Tolerance |
title_sort | genome-wide analysis of the gras gene family and functional identification of gmgras37 in drought and salt tolerance |
topic | Plant Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7793673/ https://www.ncbi.nlm.nih.gov/pubmed/33424904 http://dx.doi.org/10.3389/fpls.2020.604690 |
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