NGS-Based S. aureus Typing and Outbreak Analysis in Clinical Microbiology Laboratories: Lessons Learned From a Swiss-Wide Proficiency Test

Whole genome sequencing (WGS) enables high resolution typing of bacteria up to the single nucleotide polymorphism (SNP) level. WGS is used in clinical microbiology laboratories for infection control, molecular surveillance and outbreak analyses. Given the large palette of WGS reagents and bioinforma...

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Detalles Bibliográficos
Autores principales: Dylus, David, Pillonel, Trestan, Opota, Onya, Wüthrich, Daniel, Seth-Smith, Helena M. B., Egli, Adrian, Leo, Stefano, Lazarevic, Vladimir, Schrenzel, Jacques, Laurent, Sacha, Bertelli, Claire, Blanc, Dominique S., Neuenschwander, Stefan, Ramette, Alban, Falquet, Laurent, Imkamp, Frank, Keller, Peter M., Kahles, Andre, Oberhaensli, Simone, Barbié, Valérie, Dessimoz, Christophe, Greub, Gilbert, Lebrand, Aitana
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Microbiology
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7793906/
https://www.ncbi.nlm.nih.gov/pubmed/33424794
http://dx.doi.org/10.3389/fmicb.2020.591093

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