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Chest X-ray image phase features for improved diagnosis of COVID-19 using convolutional neural network

PURPOSE: Recently, the outbreak of the novel coronavirus disease 2019 (COVID-19) pandemic has seriously endangered human health and life. In fighting against COVID-19, effective diagnosis of infected patient is critical for preventing the spread of diseases. Due to limited availability of test kits,...

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Autores principales: Qi, Xiao, Brown, Lloyd G., Foran, David J., Nosher, John, Hacihaliloglu, Ilker
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7794081/
https://www.ncbi.nlm.nih.gov/pubmed/33420641
http://dx.doi.org/10.1007/s11548-020-02305-w
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author Qi, Xiao
Brown, Lloyd G.
Foran, David J.
Nosher, John
Hacihaliloglu, Ilker
author_facet Qi, Xiao
Brown, Lloyd G.
Foran, David J.
Nosher, John
Hacihaliloglu, Ilker
author_sort Qi, Xiao
collection PubMed
description PURPOSE: Recently, the outbreak of the novel coronavirus disease 2019 (COVID-19) pandemic has seriously endangered human health and life. In fighting against COVID-19, effective diagnosis of infected patient is critical for preventing the spread of diseases. Due to limited availability of test kits, the need for auxiliary diagnostic approach has increased. Recent research has shown radiography of COVID-19 patient, such as CT and X-ray, contains salient information about the COVID-19 virus and could be used as an alternative diagnosis method. Chest X-ray (CXR) due to its faster imaging time, wide availability, low cost, and portability gains much attention and becomes very promising. In order to reduce intra- and inter-observer variability, during radiological assessment, computer-aided diagnostic tools have been used in order to supplement medical decision making and subsequent management. Computational methods with high accuracy and robustness are required for rapid triaging of patients and aiding radiologist in the interpretation of the collected data. METHOD: In this study, we design a novel multi-feature convolutional neural network (CNN) architecture for multi-class improved classification of COVID-19 from CXR images. CXR images are enhanced using a local phase-based image enhancement method. The enhanced images, together with the original CXR data, are used as an input to our proposed CNN architecture. Using ablation studies, we show the effectiveness of the enhanced images in improving the diagnostic accuracy. We provide quantitative evaluation on two datasets and qualitative results for visual inspection. Quantitative evaluation is performed on data consisting of 8851 normal (healthy), 6045 pneumonia, and 3323 COVID-19 CXR scans. RESULTS: In Dataset-1, our model achieves 95.57% average accuracy for a three classes classification, 99% precision, recall, and F1-scores for COVID-19 cases. For Dataset-2, we have obtained 94.44% average accuracy, and 95% precision, recall, and F1-scores for detection of COVID-19. CONCLUSIONS: Our proposed multi-feature-guided CNN achieves improved results compared to single-feature CNN proving the importance of the local phase-based CXR image enhancement. Future work will involve further evaluation of the proposed method on a larger-size COVID-19 dataset as they become available.
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spelling pubmed-77940812021-01-11 Chest X-ray image phase features for improved diagnosis of COVID-19 using convolutional neural network Qi, Xiao Brown, Lloyd G. Foran, David J. Nosher, John Hacihaliloglu, Ilker Int J Comput Assist Radiol Surg Original Article PURPOSE: Recently, the outbreak of the novel coronavirus disease 2019 (COVID-19) pandemic has seriously endangered human health and life. In fighting against COVID-19, effective diagnosis of infected patient is critical for preventing the spread of diseases. Due to limited availability of test kits, the need for auxiliary diagnostic approach has increased. Recent research has shown radiography of COVID-19 patient, such as CT and X-ray, contains salient information about the COVID-19 virus and could be used as an alternative diagnosis method. Chest X-ray (CXR) due to its faster imaging time, wide availability, low cost, and portability gains much attention and becomes very promising. In order to reduce intra- and inter-observer variability, during radiological assessment, computer-aided diagnostic tools have been used in order to supplement medical decision making and subsequent management. Computational methods with high accuracy and robustness are required for rapid triaging of patients and aiding radiologist in the interpretation of the collected data. METHOD: In this study, we design a novel multi-feature convolutional neural network (CNN) architecture for multi-class improved classification of COVID-19 from CXR images. CXR images are enhanced using a local phase-based image enhancement method. The enhanced images, together with the original CXR data, are used as an input to our proposed CNN architecture. Using ablation studies, we show the effectiveness of the enhanced images in improving the diagnostic accuracy. We provide quantitative evaluation on two datasets and qualitative results for visual inspection. Quantitative evaluation is performed on data consisting of 8851 normal (healthy), 6045 pneumonia, and 3323 COVID-19 CXR scans. RESULTS: In Dataset-1, our model achieves 95.57% average accuracy for a three classes classification, 99% precision, recall, and F1-scores for COVID-19 cases. For Dataset-2, we have obtained 94.44% average accuracy, and 95% precision, recall, and F1-scores for detection of COVID-19. CONCLUSIONS: Our proposed multi-feature-guided CNN achieves improved results compared to single-feature CNN proving the importance of the local phase-based CXR image enhancement. Future work will involve further evaluation of the proposed method on a larger-size COVID-19 dataset as they become available. Springer International Publishing 2021-01-09 2021 /pmc/articles/PMC7794081/ /pubmed/33420641 http://dx.doi.org/10.1007/s11548-020-02305-w Text en © CARS 2021 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Original Article
Qi, Xiao
Brown, Lloyd G.
Foran, David J.
Nosher, John
Hacihaliloglu, Ilker
Chest X-ray image phase features for improved diagnosis of COVID-19 using convolutional neural network
title Chest X-ray image phase features for improved diagnosis of COVID-19 using convolutional neural network
title_full Chest X-ray image phase features for improved diagnosis of COVID-19 using convolutional neural network
title_fullStr Chest X-ray image phase features for improved diagnosis of COVID-19 using convolutional neural network
title_full_unstemmed Chest X-ray image phase features for improved diagnosis of COVID-19 using convolutional neural network
title_short Chest X-ray image phase features for improved diagnosis of COVID-19 using convolutional neural network
title_sort chest x-ray image phase features for improved diagnosis of covid-19 using convolutional neural network
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7794081/
https://www.ncbi.nlm.nih.gov/pubmed/33420641
http://dx.doi.org/10.1007/s11548-020-02305-w
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