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Robust Species Distribution Mapping of Crop Mixtures Using Color Images and Convolutional Neural Networks
Crop mixtures are often beneficial in crop rotations to enhance resource utilization and yield stability. While targeted management, dependent on the local species composition, has the potential to increase the crop value, it comes at a higher expense in terms of field surveys. As fine-grained speci...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7794678/ https://www.ncbi.nlm.nih.gov/pubmed/33383904 http://dx.doi.org/10.3390/s21010175 |
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author | Skovsen, Søren Kelstrup Laursen, Morten Stigaard Kristensen, Rebekka Kjeldgaard Rasmussen, Jim Dyrmann, Mads Eriksen, Jørgen Gislum, René Jørgensen, Rasmus Nyholm Karstoft, Henrik |
author_facet | Skovsen, Søren Kelstrup Laursen, Morten Stigaard Kristensen, Rebekka Kjeldgaard Rasmussen, Jim Dyrmann, Mads Eriksen, Jørgen Gislum, René Jørgensen, Rasmus Nyholm Karstoft, Henrik |
author_sort | Skovsen, Søren Kelstrup |
collection | PubMed |
description | Crop mixtures are often beneficial in crop rotations to enhance resource utilization and yield stability. While targeted management, dependent on the local species composition, has the potential to increase the crop value, it comes at a higher expense in terms of field surveys. As fine-grained species distribution mapping of within-field variation is typically unfeasible, the potential of targeted management remains an open research area. In this work, we propose a new method for determining the biomass species composition from high resolution color images using a DeepLabv3+ based convolutional neural network. Data collection has been performed at four separate experimental plot trial sites over three growing seasons. The method is thoroughly evaluated by predicting the biomass composition of different grass clover mixtures using only an image of the canopy. With a relative biomass clover content prediction of R(2) = 0.91, we present new state-of-the-art results across the largely varying sites. Combining the algorithm with an all terrain vehicle (ATV)-mounted image acquisition system, we demonstrate a feasible method for robust coverage and species distribution mapping of 225 ha of mixed crops at a median capacity of 17 ha per hour at 173 images per hectare. |
format | Online Article Text |
id | pubmed-7794678 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-77946782021-01-10 Robust Species Distribution Mapping of Crop Mixtures Using Color Images and Convolutional Neural Networks Skovsen, Søren Kelstrup Laursen, Morten Stigaard Kristensen, Rebekka Kjeldgaard Rasmussen, Jim Dyrmann, Mads Eriksen, Jørgen Gislum, René Jørgensen, Rasmus Nyholm Karstoft, Henrik Sensors (Basel) Article Crop mixtures are often beneficial in crop rotations to enhance resource utilization and yield stability. While targeted management, dependent on the local species composition, has the potential to increase the crop value, it comes at a higher expense in terms of field surveys. As fine-grained species distribution mapping of within-field variation is typically unfeasible, the potential of targeted management remains an open research area. In this work, we propose a new method for determining the biomass species composition from high resolution color images using a DeepLabv3+ based convolutional neural network. Data collection has been performed at four separate experimental plot trial sites over three growing seasons. The method is thoroughly evaluated by predicting the biomass composition of different grass clover mixtures using only an image of the canopy. With a relative biomass clover content prediction of R(2) = 0.91, we present new state-of-the-art results across the largely varying sites. Combining the algorithm with an all terrain vehicle (ATV)-mounted image acquisition system, we demonstrate a feasible method for robust coverage and species distribution mapping of 225 ha of mixed crops at a median capacity of 17 ha per hour at 173 images per hectare. MDPI 2020-12-29 /pmc/articles/PMC7794678/ /pubmed/33383904 http://dx.doi.org/10.3390/s21010175 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Skovsen, Søren Kelstrup Laursen, Morten Stigaard Kristensen, Rebekka Kjeldgaard Rasmussen, Jim Dyrmann, Mads Eriksen, Jørgen Gislum, René Jørgensen, Rasmus Nyholm Karstoft, Henrik Robust Species Distribution Mapping of Crop Mixtures Using Color Images and Convolutional Neural Networks |
title | Robust Species Distribution Mapping of Crop Mixtures Using Color Images and Convolutional Neural Networks |
title_full | Robust Species Distribution Mapping of Crop Mixtures Using Color Images and Convolutional Neural Networks |
title_fullStr | Robust Species Distribution Mapping of Crop Mixtures Using Color Images and Convolutional Neural Networks |
title_full_unstemmed | Robust Species Distribution Mapping of Crop Mixtures Using Color Images and Convolutional Neural Networks |
title_short | Robust Species Distribution Mapping of Crop Mixtures Using Color Images and Convolutional Neural Networks |
title_sort | robust species distribution mapping of crop mixtures using color images and convolutional neural networks |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7794678/ https://www.ncbi.nlm.nih.gov/pubmed/33383904 http://dx.doi.org/10.3390/s21010175 |
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