Cargando…

Global Genome Conformational Programming during Neuronal Development Is Associated with CTCF and Nuclear FGFR1—The Genome Archipelago Model

During the development of mouse embryonic stem cells (ESC) to neuronal committed cells (NCC), coordinated changes in the expression of 2851 genes take place, mediated by the nuclear form of FGFR1. In this paper, widespread differences are demonstrated in the ESC and NCC inter- and intra-chromosomal...

Descripción completa

Detalles Bibliográficos
Autores principales:	Decker, Brandon, Liput, Michal, Abdellatif, Hussam, Yergeau, Donald, Bae, Yongho, Jornet, Josep M., Stachowiak, Ewa K., Stachowiak, Michal K.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	MDPI 2020
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7795191/ https://www.ncbi.nlm.nih.gov/pubmed/33396256 http://dx.doi.org/10.3390/ijms22010347

Ejemplares similares

Evidence‐Based Theory for Integrated Genome Regulation of Ontogeny—An Unprecedented Role of Nuclear FGFR1 Signaling
por: Stachowiak, Michal K., et al.
Publicado: (2016)

NGF-Induced Cell Differentiation and Gene Activation Is Mediated by Integrative Nuclear FGFR1 Signaling (INFS)
por: Lee, Yu-Wei, et al.
Publicado: (2013)

A proof of concept ‘phase zero’ study of neurodevelopment using brain organoid models with Vis/near-infrared spectroscopy and electrophysiology
por: Dutta, Anirban, et al.
Publicado: (2020)

Global Developmental Gene Programing Involves a Nuclear Form of Fibroblast Growth Factor Receptor-1 (FGFR1)
por: Terranova, Christopher, et al.
Publicado: (2015)

Immune Factor, TNFα, Disrupts Human Brain Organoid Development Similar to Schizophrenia—Schizophrenia Increases Developmental Vulnerability to TNFα
por: Benson, Courtney A., et al.
Publicado: (2020)

Cerebral organoids reveal early cortical maldevelopment in schizophrenia—computational anatomy and genomics, role of FGFR1
por: Stachowiak, E. K., et al.
Publicado: (2017)

New RNA Structural Elements Identified in the Coding Region of the Coxsackie B3 Virus Genome
por: Dutkiewicz, Mariola, et al.
Publicado: (2020)

Unveiling the Latest Developments in Molecularly Imprinted Photocatalysts: A State-of-the-Art Review
por: Kubiak, Adam, et al.
Publicado: (2023)

Bioenergy Crisis in Coronavirus Diseases?
por: Dutta, Anirban, et al.
Publicado: (2020)

Polyethyleneimine-mediated transfection of cultured postmitotic neurons from rat sympathetic ganglia and adult human retina
por: Horbinski, Craig, et al.
Publicado: (2001)

Comparative analyses of CTCF and BORIS occupancies uncover two distinct classes of CTCF binding genomic regions
por: Pugacheva, Elena M., et al.
Publicado: (2015)

Comprehensive Ecotoxicity Studies on Quaternary Ammonium Salts Synthesized from Vitamin B(3) Supported by QSAR Calculations
por: Nowacka, Aleksandra, et al.
Publicado: (2023)

Adjustment of the Structure of the Simplest Amino Acid Present in Nature—Glycine, toward More Environmentally Friendly Ionic Forms of Phenoxypropionate-Based Herbicides
por: Olejniczak, Adriana, et al.
Publicado: (2023)

Molecular basis of CTCF binding polarity in genome folding
por: Nora, Elphège P., et al.
Publicado: (2020)

Sustainable Design of New Ionic Forms of Vitamin B(3) and Their Utilization as Plant Protection Agents
por: Stachowiak, Witold, et al.
Publicado: (2022)

Genomic Marks Associated with Chromatin Compartments in the CTCF, RNAPII Loop and Genomic Windows
por: Szczepińska, Teresa, et al.
Publicado: (2021)

The last sea nomads of the Indonesian archipelago: genomic origins and dispersal
por: Kusuma, Pradiptajati, et al.
Publicado: (2017)

Genomic retargeting of p53 and CTCF is associated with transcriptional changes during oncogenic HRas-induced transformation
por: Schwartz, Michal, et al.
Publicado: (2020)

Laser-Based Monitoring of CH(4), CO(2), NH(3), and H(2)S in Animal Farming—System Characterization and Initial Demonstration
por: Stachowiak, Dorota, et al.
Publicado: (2018)

CTCF Genomic Binding Sites in Drosophila and the Organisation of the Bithorax Complex
por: Holohan, Eimear E, et al.
Publicado: (2007)

Adaptive Evolution and the Birth of CTCF Binding Sites in the Drosophila Genome
por: Ni, Xiaochun, et al.
Publicado: (2012)

CTCF as a multifunctional protein in genome regulation and gene expression
por: Kim, Somi, et al.
Publicado: (2015)

Defining the relative and combined contribution of CTCF and CTCFL to genomic regulation
por: Nishana, Mayilaadumveettil, et al.
Publicado: (2020)

Acute depletion of CTCF rewires genome-wide chromatin accessibility
por: Xu, Beisi, et al.
Publicado: (2021)

Maternal protein and folic acid intake during gestation does not program leptin transcription or serum concentration in rat progeny
por: Chmurzynska, Agata, et al.
Publicado: (2011)

Functioning of Women with Migraine Headaches
por: Talarska, Dorota, et al.
Publicado: (2014)

The role of CTCF in regulating nuclear organization
por: Williams, Adam, et al.
Publicado: (2008)

Intra- and inter-chromosomal interactions correlate with CTCF binding genome wide
por: Botta, Marco, et al.
Publicado: (2010)

HTLV-1 inserts an ectopic CTCF-binding site into the human genome
por: Satou, Yorifumi, et al.
Publicado: (2015)

CTCF interacts with the lytic HSV-1 genome to promote viral transcription
por: Lang, Fengchao, et al.
Publicado: (2017)

Predicting CTCF-mediated chromatin interactions by integrating genomic and epigenomic features
por: Kai, Yan, et al.
Publicado: (2018)

LATS kinase–mediated CTCF phosphorylation and selective loss of genomic binding
por: Luo, Huacheng, et al.
Publicado: (2020)

Identification and analysis of consensus RNA motifs binding to the genome regulator CTCF
por: Kuang, Shuzhen, et al.
Publicado: (2020)

CTCF and Its Partners: Shaper of 3D Genome during Development
por: Sun, Xiaoyue, et al.
Publicado: (2022)

Systematic screening of CTCF binding partners identifies that BHLHE40 regulates CTCF genome-wide distribution and long-range chromatin interactions
por: Hu, Gongcheng, et al.
Publicado: (2020)

Genome-Wide Histone Modifications and CTCF Enrichment Predict Gene Expression in Sheep Macrophages
por: Massa, Alisha T., et al.
Publicado: (2021)

TET-Catalyzed 5-Carboxylcytosine Promotes CTCF Binding to Suboptimal Sequences Genome-wide
por: Nanan, Kyster K., et al.
Publicado: (2019)

Clathrin: Bender or bystander?
por: Stachowiak, Jeanne C.
Publicado: (2022)

Coordination of KSHV Latent and Lytic Gene Control by CTCF-Cohesin Mediated Chromosome Conformation
por: Kang, Hyojeung, et al.
Publicado: (2011)

The Malay Archipelago
por: Goldhor, Susan
Publicado: (1964)

Cannot write session to /tmp/vufind_sessions/sess_jo0rl9abck3pmqq38tibb06pit