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Classification of Congeneric and QSAR of Homologous Antileukemic S–Alkylcysteine Ketones

Based on a set of six vector properties, the partial correlation diagram is calculated for a set of 28 S-alkylcysteine diazomethyl- and chloromethyl-ketone derivatives. Those with the greatest antileukemic activity in the same class correspond to high partial correlations. A periodic classification...

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Autores principales: Castellano, Gloria, León, Adela, Torrens, Francisco
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7795853/
https://www.ncbi.nlm.nih.gov/pubmed/33466352
http://dx.doi.org/10.3390/molecules26010235
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author Castellano, Gloria
León, Adela
Torrens, Francisco
author_facet Castellano, Gloria
León, Adela
Torrens, Francisco
author_sort Castellano, Gloria
collection PubMed
description Based on a set of six vector properties, the partial correlation diagram is calculated for a set of 28 S-alkylcysteine diazomethyl- and chloromethyl-ketone derivatives. Those with the greatest antileukemic activity in the same class correspond to high partial correlations. A periodic classification is performed based on information entropy. The first four characteristics denote the group, and the last two indicate the period. Compounds in the same period and, especially, group present similar properties. The most active substances are situated at the bottom right. Nine classes are distinguished. The principal component analysis of the homologous compounds shows five subclasses included in the periodic classification. Linear fits of both antileukemic activities and stability are good. They are in agreement with the principal component analysis. The variables that appear in the models are those that show positive loading in the principal component analysis. The most important properties to explain the antileukemic activities (50% inhibitory concentration Molt-3 T-lineage acute lymphoblastic leukemia minus the logarithm of 50% inhibitory concentration Nalm-6 B-lineage acute lymphoblastic leukemia and stability k) are ACD logD, surface tension and number of violations of Lipinski’s rule of five. After leave-m-out cross-validation, the most predictive model for cysteine diazomethyl- and chloromethyl-ketone derivatives is provided.
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spelling pubmed-77958532021-01-10 Classification of Congeneric and QSAR of Homologous Antileukemic S–Alkylcysteine Ketones Castellano, Gloria León, Adela Torrens, Francisco Molecules Article Based on a set of six vector properties, the partial correlation diagram is calculated for a set of 28 S-alkylcysteine diazomethyl- and chloromethyl-ketone derivatives. Those with the greatest antileukemic activity in the same class correspond to high partial correlations. A periodic classification is performed based on information entropy. The first four characteristics denote the group, and the last two indicate the period. Compounds in the same period and, especially, group present similar properties. The most active substances are situated at the bottom right. Nine classes are distinguished. The principal component analysis of the homologous compounds shows five subclasses included in the periodic classification. Linear fits of both antileukemic activities and stability are good. They are in agreement with the principal component analysis. The variables that appear in the models are those that show positive loading in the principal component analysis. The most important properties to explain the antileukemic activities (50% inhibitory concentration Molt-3 T-lineage acute lymphoblastic leukemia minus the logarithm of 50% inhibitory concentration Nalm-6 B-lineage acute lymphoblastic leukemia and stability k) are ACD logD, surface tension and number of violations of Lipinski’s rule of five. After leave-m-out cross-validation, the most predictive model for cysteine diazomethyl- and chloromethyl-ketone derivatives is provided. MDPI 2021-01-05 /pmc/articles/PMC7795853/ /pubmed/33466352 http://dx.doi.org/10.3390/molecules26010235 Text en © 2021 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Castellano, Gloria
León, Adela
Torrens, Francisco
Classification of Congeneric and QSAR of Homologous Antileukemic S–Alkylcysteine Ketones
title Classification of Congeneric and QSAR of Homologous Antileukemic S–Alkylcysteine Ketones
title_full Classification of Congeneric and QSAR of Homologous Antileukemic S–Alkylcysteine Ketones
title_fullStr Classification of Congeneric and QSAR of Homologous Antileukemic S–Alkylcysteine Ketones
title_full_unstemmed Classification of Congeneric and QSAR of Homologous Antileukemic S–Alkylcysteine Ketones
title_short Classification of Congeneric and QSAR of Homologous Antileukemic S–Alkylcysteine Ketones
title_sort classification of congeneric and qsar of homologous antileukemic s–alkylcysteine ketones
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7795853/
https://www.ncbi.nlm.nih.gov/pubmed/33466352
http://dx.doi.org/10.3390/molecules26010235
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