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New assessment of Anopheles vector species identification using MALDI-TOF MS
BACKGROUND: Anopheles species identification is essential for an effective malaria vector control programme. Matrix-assisted laser desorption ionization-time of flight (MALDI-TOF) mass spectrometry (MS) has been developed to identify adult Anopheles species, using the legs or the cephalothorax. The...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7796594/ https://www.ncbi.nlm.nih.gov/pubmed/33422056 http://dx.doi.org/10.1186/s12936-020-03557-2 |
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author | Nabet, Cécile Kone, Abdoulaye K. Dia, Abdoulaye K. Sylla, Moussa Gautier, Magali Yattara, Mohammed Thera, Mahamadou A. Faye, Ousmane Braack, Leo Manguin, Sylvie Beavogui, Abdoul H. Doumbo, Ogobara Gay, Frédérick Piarroux, Renaud |
author_facet | Nabet, Cécile Kone, Abdoulaye K. Dia, Abdoulaye K. Sylla, Moussa Gautier, Magali Yattara, Mohammed Thera, Mahamadou A. Faye, Ousmane Braack, Leo Manguin, Sylvie Beavogui, Abdoul H. Doumbo, Ogobara Gay, Frédérick Piarroux, Renaud |
author_sort | Nabet, Cécile |
collection | PubMed |
description | BACKGROUND: Anopheles species identification is essential for an effective malaria vector control programme. Matrix-assisted laser desorption ionization-time of flight (MALDI-TOF) mass spectrometry (MS) has been developed to identify adult Anopheles species, using the legs or the cephalothorax. The protein repertoire from arthropods can vary according to compartment, but there is no general consensus regarding the anatomic part to be used. METHODS: To determine the body part of the Anopheles mosquitoes best suited for the identification of field specimens, a mass spectral library was generated with head, thorax with wings and legs of Anopheles gambiae, Anopheles arabiensis and Anopheles funestus obtained from reference centres. The MSL was evaluated using two independent panels of 52 and 40 An. gambiae field-collected in Mali and Guinea, respectively. Geographic variability was also tested using the panel from Mali and several databases containing added specimens from Mali and Senegal. RESULTS: Using the head and a database without specimens from the same field collection, the proportion of interpretable and correct identifications was significantly higher than using the other body parts at a threshold value of 1.7 (p < 0.0001). The thorax of engorged specimens was negatively impacted by the blood meal after frozen storage. The addition of specimens from Mali into the database significantly improved the results of Mali panel (p < 0.0001), which became comparable between head and legs. With higher identification scores, the using of the head will allow to decrease the number of technical replicates of protein extract per specimen, which represents a significant improvement for routine use of MALDI-TOF MS. CONCLUSIONS: The using of the head of Anopheles may improve the performance of MALDI-TOF MS. Region-specific mass spectrum databases will have to be produced. Further research is needed to improve the standardization in order to share online spectral databases. |
format | Online Article Text |
id | pubmed-7796594 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-77965942021-01-11 New assessment of Anopheles vector species identification using MALDI-TOF MS Nabet, Cécile Kone, Abdoulaye K. Dia, Abdoulaye K. Sylla, Moussa Gautier, Magali Yattara, Mohammed Thera, Mahamadou A. Faye, Ousmane Braack, Leo Manguin, Sylvie Beavogui, Abdoul H. Doumbo, Ogobara Gay, Frédérick Piarroux, Renaud Malar J Research BACKGROUND: Anopheles species identification is essential for an effective malaria vector control programme. Matrix-assisted laser desorption ionization-time of flight (MALDI-TOF) mass spectrometry (MS) has been developed to identify adult Anopheles species, using the legs or the cephalothorax. The protein repertoire from arthropods can vary according to compartment, but there is no general consensus regarding the anatomic part to be used. METHODS: To determine the body part of the Anopheles mosquitoes best suited for the identification of field specimens, a mass spectral library was generated with head, thorax with wings and legs of Anopheles gambiae, Anopheles arabiensis and Anopheles funestus obtained from reference centres. The MSL was evaluated using two independent panels of 52 and 40 An. gambiae field-collected in Mali and Guinea, respectively. Geographic variability was also tested using the panel from Mali and several databases containing added specimens from Mali and Senegal. RESULTS: Using the head and a database without specimens from the same field collection, the proportion of interpretable and correct identifications was significantly higher than using the other body parts at a threshold value of 1.7 (p < 0.0001). The thorax of engorged specimens was negatively impacted by the blood meal after frozen storage. The addition of specimens from Mali into the database significantly improved the results of Mali panel (p < 0.0001), which became comparable between head and legs. With higher identification scores, the using of the head will allow to decrease the number of technical replicates of protein extract per specimen, which represents a significant improvement for routine use of MALDI-TOF MS. CONCLUSIONS: The using of the head of Anopheles may improve the performance of MALDI-TOF MS. Region-specific mass spectrum databases will have to be produced. Further research is needed to improve the standardization in order to share online spectral databases. BioMed Central 2021-01-09 /pmc/articles/PMC7796594/ /pubmed/33422056 http://dx.doi.org/10.1186/s12936-020-03557-2 Text en © The Author(s) 2021 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Nabet, Cécile Kone, Abdoulaye K. Dia, Abdoulaye K. Sylla, Moussa Gautier, Magali Yattara, Mohammed Thera, Mahamadou A. Faye, Ousmane Braack, Leo Manguin, Sylvie Beavogui, Abdoul H. Doumbo, Ogobara Gay, Frédérick Piarroux, Renaud New assessment of Anopheles vector species identification using MALDI-TOF MS |
title | New assessment of Anopheles vector species identification using MALDI-TOF MS |
title_full | New assessment of Anopheles vector species identification using MALDI-TOF MS |
title_fullStr | New assessment of Anopheles vector species identification using MALDI-TOF MS |
title_full_unstemmed | New assessment of Anopheles vector species identification using MALDI-TOF MS |
title_short | New assessment of Anopheles vector species identification using MALDI-TOF MS |
title_sort | new assessment of anopheles vector species identification using maldi-tof ms |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7796594/ https://www.ncbi.nlm.nih.gov/pubmed/33422056 http://dx.doi.org/10.1186/s12936-020-03557-2 |
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