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The complete plastid genome sequence of Chrysanthemum lucidum (Asteraceae): an endemic species of Ulleung Island of Korea
The characteristic of complete chloroplast (cp) genome sequence of Chrysanthemum lucidum, one of famous insular plant and an endemic to Ulleung Island of Korea, was firstly introduced in the present study. It was 150,985 bp and contained a large single copy region (82,786 bp) and a small single copy...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2018
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799449/ https://www.ncbi.nlm.nih.gov/pubmed/33474210 http://dx.doi.org/10.1080/23802359.2018.1463147 |
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author | Kim, Jung Sung Lee, Woong Pak, Jae-Hong |
author_facet | Kim, Jung Sung Lee, Woong Pak, Jae-Hong |
author_sort | Kim, Jung Sung |
collection | PubMed |
description | The characteristic of complete chloroplast (cp) genome sequence of Chrysanthemum lucidum, one of famous insular plant and an endemic to Ulleung Island of Korea, was firstly introduced in the present study. It was 150,985 bp and contained a large single copy region (82,786 bp) and a small single copy region (18,281 bp) which were separated by two inverted repeat regions (24,959 bp). In total, 131 genes were identified and they were consisted of 76 coding genes, eight rRNA genes, and 36 tRNA genes. Comparing to the previously reported Chrysanthemum indicum and C. x morifolium cp genomes, we found complete inversion of SSC region in this taxa. rpoC1 gene was pseudogenes due to 1 bp insertion of poly-A sequence in the 3′ of exon 2. |
format | Online Article Text |
id | pubmed-7799449 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77994492021-01-19 The complete plastid genome sequence of Chrysanthemum lucidum (Asteraceae): an endemic species of Ulleung Island of Korea Kim, Jung Sung Lee, Woong Pak, Jae-Hong Mitochondrial DNA B Resour Mitogenome Announcement The characteristic of complete chloroplast (cp) genome sequence of Chrysanthemum lucidum, one of famous insular plant and an endemic to Ulleung Island of Korea, was firstly introduced in the present study. It was 150,985 bp and contained a large single copy region (82,786 bp) and a small single copy region (18,281 bp) which were separated by two inverted repeat regions (24,959 bp). In total, 131 genes were identified and they were consisted of 76 coding genes, eight rRNA genes, and 36 tRNA genes. Comparing to the previously reported Chrysanthemum indicum and C. x morifolium cp genomes, we found complete inversion of SSC region in this taxa. rpoC1 gene was pseudogenes due to 1 bp insertion of poly-A sequence in the 3′ of exon 2. Taylor & Francis 2018-04-23 /pmc/articles/PMC7799449/ /pubmed/33474210 http://dx.doi.org/10.1080/23802359.2018.1463147 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Kim, Jung Sung Lee, Woong Pak, Jae-Hong The complete plastid genome sequence of Chrysanthemum lucidum (Asteraceae): an endemic species of Ulleung Island of Korea |
title | The complete plastid genome sequence of Chrysanthemum lucidum (Asteraceae): an endemic species of Ulleung Island of Korea |
title_full | The complete plastid genome sequence of Chrysanthemum lucidum (Asteraceae): an endemic species of Ulleung Island of Korea |
title_fullStr | The complete plastid genome sequence of Chrysanthemum lucidum (Asteraceae): an endemic species of Ulleung Island of Korea |
title_full_unstemmed | The complete plastid genome sequence of Chrysanthemum lucidum (Asteraceae): an endemic species of Ulleung Island of Korea |
title_short | The complete plastid genome sequence of Chrysanthemum lucidum (Asteraceae): an endemic species of Ulleung Island of Korea |
title_sort | complete plastid genome sequence of chrysanthemum lucidum (asteraceae): an endemic species of ulleung island of korea |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799449/ https://www.ncbi.nlm.nih.gov/pubmed/33474210 http://dx.doi.org/10.1080/23802359.2018.1463147 |
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