Complete chloroplast genome of Actaea heracleifolia (Kom.) J. Compton

Dried rhizomes of Actaea heracleifolia, used as a traditional Korean herbal medicine, are frequently adulterated with other plant species. For accurate species identification, we sequenced the complete chloroplast genome of A. heracleifolia using Illumina MiSeq. A. heracleifolia harbours a 159,578 b...

Descripción completa

Detalles Bibliográficos
Autores principales: Park, Inkyu, Yang, Sungyu, Kim, Wook Jin, Noh, Pureum, Lee, Hyun Oh, Moon, Byeong Cheol
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799459/
https://www.ncbi.nlm.nih.gov/pubmed/33474372
http://dx.doi.org/10.1080/23802359.2018.1502636
_version_ 1783635133283172352
author Park, Inkyu
Yang, Sungyu
Kim, Wook Jin
Noh, Pureum
Lee, Hyun Oh
Moon, Byeong Cheol
author_facet Park, Inkyu
Yang, Sungyu
Kim, Wook Jin
Noh, Pureum
Lee, Hyun Oh
Moon, Byeong Cheol
author_sort Park, Inkyu
collection PubMed
description Dried rhizomes of Actaea heracleifolia, used as a traditional Korean herbal medicine, are frequently adulterated with other plant species. For accurate species identification, we sequenced the complete chloroplast genome of A. heracleifolia using Illumina MiSeq. A. heracleifolia harbours a 159,578 bp chloroplast genome comprising a large single-copy region (88,770 bp), small single-copy region (18,070 bp) and two inverted repeat (IR) regions (IRa and IRb; each 26,519 bp). The chloroplast genome contains 112 unique genes, including 78 protein-coding genes, 4 ribosomal RNA genes, and 30 transfer RNA genes. Phylogenetic analysis revealed that A. heracleifolia was closely related to Gymnaconitum gymnandrum.
format Online
Article
Text
id pubmed-7799459
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77994592021-01-19 Complete chloroplast genome of Actaea heracleifolia (Kom.) J. Compton Park, Inkyu Yang, Sungyu Kim, Wook Jin Noh, Pureum Lee, Hyun Oh Moon, Byeong Cheol Mitochondrial DNA B Resour Mitogenome Announcement Dried rhizomes of Actaea heracleifolia, used as a traditional Korean herbal medicine, are frequently adulterated with other plant species. For accurate species identification, we sequenced the complete chloroplast genome of A. heracleifolia using Illumina MiSeq. A. heracleifolia harbours a 159,578 bp chloroplast genome comprising a large single-copy region (88,770 bp), small single-copy region (18,070 bp) and two inverted repeat (IR) regions (IRa and IRb; each 26,519 bp). The chloroplast genome contains 112 unique genes, including 78 protein-coding genes, 4 ribosomal RNA genes, and 30 transfer RNA genes. Phylogenetic analysis revealed that A. heracleifolia was closely related to Gymnaconitum gymnandrum. Taylor & Francis 2018-08-23 /pmc/articles/PMC7799459/ /pubmed/33474372 http://dx.doi.org/10.1080/23802359.2018.1502636 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Park, Inkyu
Yang, Sungyu
Kim, Wook Jin
Noh, Pureum
Lee, Hyun Oh
Moon, Byeong Cheol
Complete chloroplast genome of Actaea heracleifolia (Kom.) J. Compton
title Complete chloroplast genome of Actaea heracleifolia (Kom.) J. Compton
title_full Complete chloroplast genome of Actaea heracleifolia (Kom.) J. Compton
title_fullStr Complete chloroplast genome of Actaea heracleifolia (Kom.) J. Compton
title_full_unstemmed Complete chloroplast genome of Actaea heracleifolia (Kom.) J. Compton
title_short Complete chloroplast genome of Actaea heracleifolia (Kom.) J. Compton
title_sort complete chloroplast genome of actaea heracleifolia (kom.) j. compton
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799459/
https://www.ncbi.nlm.nih.gov/pubmed/33474372
http://dx.doi.org/10.1080/23802359.2018.1502636
work_keys_str_mv AT parkinkyu completechloroplastgenomeofactaeaheracleifoliakomjcompton
AT yangsungyu completechloroplastgenomeofactaeaheracleifoliakomjcompton
AT kimwookjin completechloroplastgenomeofactaeaheracleifoliakomjcompton
AT nohpureum completechloroplastgenomeofactaeaheracleifoliakomjcompton
AT leehyunoh completechloroplastgenomeofactaeaheracleifoliakomjcompton
AT moonbyeongcheol completechloroplastgenomeofactaeaheracleifoliakomjcompton

Ejemplares similares