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Complete mitochondrial genome of the endangered flower chafer Osmoderma opicum (Coleoptera: Scarabaeidae)
The flower chafer Osmoderma opicum (Coleoptera: Scarabaeidae) has been listed in Korea as a class II endangered wild species. The 15 341-bp complete mitochondrial genome (mitogenome) of the species consists of a typical set of genes (13 protein-coding genes [PCGs], two rRNA genes and 22 tRNA genes)...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799465/ https://www.ncbi.nlm.nih.gov/pubmed/33473440 http://dx.doi.org/10.1080/23802359.2016.1144104 |
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author | Kim, Min Jee Jeong, Su Yeon Jeong, Jong-Chul Kim, Sung-Soo Kim, Iksoo |
author_facet | Kim, Min Jee Jeong, Su Yeon Jeong, Jong-Chul Kim, Sung-Soo Kim, Iksoo |
author_sort | Kim, Min Jee |
collection | PubMed |
description | The flower chafer Osmoderma opicum (Coleoptera: Scarabaeidae) has been listed in Korea as a class II endangered wild species. The 15 341-bp complete mitochondrial genome (mitogenome) of the species consists of a typical set of genes (13 protein-coding genes [PCGs], two rRNA genes and 22 tRNA genes) and the A + T-rich region, with an arrangement typical of insects. The 761-bp long A + T-rich region of O. opicum has a microsatellite-like sequence consisting of (TA)(6), along with a poly-T (12 bp) and a poly-A (16 bp) stretch, but does not have a longer repeat sequence often found in other Scarabaeidae. Twelve PCGs started with the typical ATN codon, whereas the COI started with AAC, which has been designated as the start codon for the coleopteran suborder Polyphaga. Phylogenetic analysis using 11 PCGs from Scarabaeidae showed that O. opicum was placed as the sister to the within-subfamilial species Myodermum sp., forming the monophyletic group, the subfamily Cetoniinae, with moderate to high nodal support. |
format | Online Article Text |
id | pubmed-7799465 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77994652021-01-19 Complete mitochondrial genome of the endangered flower chafer Osmoderma opicum (Coleoptera: Scarabaeidae) Kim, Min Jee Jeong, Su Yeon Jeong, Jong-Chul Kim, Sung-Soo Kim, Iksoo Mitochondrial DNA B Resour Mitogenome Announcement The flower chafer Osmoderma opicum (Coleoptera: Scarabaeidae) has been listed in Korea as a class II endangered wild species. The 15 341-bp complete mitochondrial genome (mitogenome) of the species consists of a typical set of genes (13 protein-coding genes [PCGs], two rRNA genes and 22 tRNA genes) and the A + T-rich region, with an arrangement typical of insects. The 761-bp long A + T-rich region of O. opicum has a microsatellite-like sequence consisting of (TA)(6), along with a poly-T (12 bp) and a poly-A (16 bp) stretch, but does not have a longer repeat sequence often found in other Scarabaeidae. Twelve PCGs started with the typical ATN codon, whereas the COI started with AAC, which has been designated as the start codon for the coleopteran suborder Polyphaga. Phylogenetic analysis using 11 PCGs from Scarabaeidae showed that O. opicum was placed as the sister to the within-subfamilial species Myodermum sp., forming the monophyletic group, the subfamily Cetoniinae, with moderate to high nodal support. Taylor & Francis 2016-02-10 /pmc/articles/PMC7799465/ /pubmed/33473440 http://dx.doi.org/10.1080/23802359.2016.1144104 Text en © 2016 The Author(s). Published by Taylor & Francis. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Kim, Min Jee Jeong, Su Yeon Jeong, Jong-Chul Kim, Sung-Soo Kim, Iksoo Complete mitochondrial genome of the endangered flower chafer Osmoderma opicum (Coleoptera: Scarabaeidae) |
title | Complete mitochondrial genome of the endangered flower chafer Osmoderma opicum (Coleoptera: Scarabaeidae) |
title_full | Complete mitochondrial genome of the endangered flower chafer Osmoderma opicum (Coleoptera: Scarabaeidae) |
title_fullStr | Complete mitochondrial genome of the endangered flower chafer Osmoderma opicum (Coleoptera: Scarabaeidae) |
title_full_unstemmed | Complete mitochondrial genome of the endangered flower chafer Osmoderma opicum (Coleoptera: Scarabaeidae) |
title_short | Complete mitochondrial genome of the endangered flower chafer Osmoderma opicum (Coleoptera: Scarabaeidae) |
title_sort | complete mitochondrial genome of the endangered flower chafer osmoderma opicum (coleoptera: scarabaeidae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799465/ https://www.ncbi.nlm.nih.gov/pubmed/33473440 http://dx.doi.org/10.1080/23802359.2016.1144104 |
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