The complete chloroplast genome of Eclipta prostrata L. (Asteraceae)

Eclipta prostrata is an herbal medicinal plant belonging to the Asteraceae family. In this study, complete chloroplast genome sequence of the E. prostrata was characterized by de novo assembly using whole genome sequence data. The genome of E. prostrata was 151,757 bp in length, which was composed o...

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Autores principales: Park, Jee Young, Lee, Yun Sun, Kim, Jin-Kyung, Lee, Hyun Oh, Park, Hyun-Seung, Lee, Sang-Choon, Kang, Jung Hwa, Lee, Taek Joo, Sung, Sang Hyun, Yang, Tae-Jin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2016
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799467/
https://www.ncbi.nlm.nih.gov/pubmed/33473502
http://dx.doi.org/10.1080/23802359.2016.1176882
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author Park, Jee Young
Lee, Yun Sun
Kim, Jin-Kyung
Lee, Hyun Oh
Park, Hyun-Seung
Lee, Sang-Choon
Kang, Jung Hwa
Lee, Taek Joo
Sung, Sang Hyun
Yang, Tae-Jin
author_facet Park, Jee Young
Lee, Yun Sun
Kim, Jin-Kyung
Lee, Hyun Oh
Park, Hyun-Seung
Lee, Sang-Choon
Kang, Jung Hwa
Lee, Taek Joo
Sung, Sang Hyun
Yang, Tae-Jin
author_sort Park, Jee Young
collection PubMed
description Eclipta prostrata is an herbal medicinal plant belonging to the Asteraceae family. In this study, complete chloroplast genome sequence of the E. prostrata was characterized by de novo assembly using whole genome sequence data. The genome of E. prostrata was 151,757 bp in length, which was composed of large single copy region of 83,285 bp, small single copy region of 18,346 bp and a pair of inverted repeat regions of 25,063 bp. The genome harboured 80 protein coding sequences, 30 tRNA genes and 4 rRNA genes. We confirmed close taxonomic relationship between E. prostrata and Helianthus annuus through phylogenetic analysis with chloroplast protein-coding genes.
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spelling pubmed-77994672021-01-19 The complete chloroplast genome of Eclipta prostrata L. (Asteraceae) Park, Jee Young Lee, Yun Sun Kim, Jin-Kyung Lee, Hyun Oh Park, Hyun-Seung Lee, Sang-Choon Kang, Jung Hwa Lee, Taek Joo Sung, Sang Hyun Yang, Tae-Jin Mitochondrial DNA B Resour Mitogenome Announcement Eclipta prostrata is an herbal medicinal plant belonging to the Asteraceae family. In this study, complete chloroplast genome sequence of the E. prostrata was characterized by de novo assembly using whole genome sequence data. The genome of E. prostrata was 151,757 bp in length, which was composed of large single copy region of 83,285 bp, small single copy region of 18,346 bp and a pair of inverted repeat regions of 25,063 bp. The genome harboured 80 protein coding sequences, 30 tRNA genes and 4 rRNA genes. We confirmed close taxonomic relationship between E. prostrata and Helianthus annuus through phylogenetic analysis with chloroplast protein-coding genes. Taylor & Francis 2016-06-20 /pmc/articles/PMC7799467/ /pubmed/33473502 http://dx.doi.org/10.1080/23802359.2016.1176882 Text en © 2016 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Park, Jee Young
Lee, Yun Sun
Kim, Jin-Kyung
Lee, Hyun Oh
Park, Hyun-Seung
Lee, Sang-Choon
Kang, Jung Hwa
Lee, Taek Joo
Sung, Sang Hyun
Yang, Tae-Jin
The complete chloroplast genome of Eclipta prostrata L. (Asteraceae)
title The complete chloroplast genome of Eclipta prostrata L. (Asteraceae)
title_full The complete chloroplast genome of Eclipta prostrata L. (Asteraceae)
title_fullStr The complete chloroplast genome of Eclipta prostrata L. (Asteraceae)
title_full_unstemmed The complete chloroplast genome of Eclipta prostrata L. (Asteraceae)
title_short The complete chloroplast genome of Eclipta prostrata L. (Asteraceae)
title_sort complete chloroplast genome of eclipta prostrata l. (asteraceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799467/
https://www.ncbi.nlm.nih.gov/pubmed/33473502
http://dx.doi.org/10.1080/23802359.2016.1176882
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