The complete chloroplast genome of Vancouveria planipetala, with implication for the phylogeny of Ranunculales

Vancouveria planipetala (Berberidaceae) is a perennial herb which has high ornamental and ecological values. In this study, we assembled the complete chloroplast (cp) genome of V. planipetala. The whole cp genome of V. planipetala is 156,871 bp in length, comprising a pair of inverted repeat (IR) re...

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Autores principales: Jin, Zhenyu, Losh, Jocelyn M., Ye, Wenqing, Li, Pan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799496/
https://www.ncbi.nlm.nih.gov/pubmed/33474266
http://dx.doi.org/10.1080/23802359.2018.1473726
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author Jin, Zhenyu
Losh, Jocelyn M.
Ye, Wenqing
Li, Pan
author_facet Jin, Zhenyu
Losh, Jocelyn M.
Ye, Wenqing
Li, Pan
author_sort Jin, Zhenyu
collection PubMed
description Vancouveria planipetala (Berberidaceae) is a perennial herb which has high ornamental and ecological values. In this study, we assembled the complete chloroplast (cp) genome of V. planipetala. The whole cp genome of V. planipetala is 156,871 bp in length, comprising a pair of inverted repeat (IR) regions (25,888 bp) separated by a large single copy (LSC) region (88,321 bp) and a small single copy (SSC) region (16,772 bp). The cp genome contains 114 unique genes, including 80 protein-coding genes, 30 tRNA, and four rRNA genes, with 17 genes duplicated in IRs. Phylogenetic analyses showed that Papaveraceae is the basal group of Ranunculales.
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spelling pubmed-77994962021-01-19 The complete chloroplast genome of Vancouveria planipetala, with implication for the phylogeny of Ranunculales Jin, Zhenyu Losh, Jocelyn M. Ye, Wenqing Li, Pan Mitochondrial DNA B Resour Mitogenome Announcement Vancouveria planipetala (Berberidaceae) is a perennial herb which has high ornamental and ecological values. In this study, we assembled the complete chloroplast (cp) genome of V. planipetala. The whole cp genome of V. planipetala is 156,871 bp in length, comprising a pair of inverted repeat (IR) regions (25,888 bp) separated by a large single copy (LSC) region (88,321 bp) and a small single copy (SSC) region (16,772 bp). The cp genome contains 114 unique genes, including 80 protein-coding genes, 30 tRNA, and four rRNA genes, with 17 genes duplicated in IRs. Phylogenetic analyses showed that Papaveraceae is the basal group of Ranunculales. Taylor & Francis 2018-05-21 /pmc/articles/PMC7799496/ /pubmed/33474266 http://dx.doi.org/10.1080/23802359.2018.1473726 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Jin, Zhenyu
Losh, Jocelyn M.
Ye, Wenqing
Li, Pan
The complete chloroplast genome of Vancouveria planipetala, with implication for the phylogeny of Ranunculales
title The complete chloroplast genome of Vancouveria planipetala, with implication for the phylogeny of Ranunculales
title_full The complete chloroplast genome of Vancouveria planipetala, with implication for the phylogeny of Ranunculales
title_fullStr The complete chloroplast genome of Vancouveria planipetala, with implication for the phylogeny of Ranunculales
title_full_unstemmed The complete chloroplast genome of Vancouveria planipetala, with implication for the phylogeny of Ranunculales
title_short The complete chloroplast genome of Vancouveria planipetala, with implication for the phylogeny of Ranunculales
title_sort complete chloroplast genome of vancouveria planipetala, with implication for the phylogeny of ranunculales
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799496/
https://www.ncbi.nlm.nih.gov/pubmed/33474266
http://dx.doi.org/10.1080/23802359.2018.1473726
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