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Complete mitochondrial genome sequence of Thryssa kammalensis (Clupeiformes, Engraulidae)
In this paper, the complete mitochondrial DNA (mtDNA) sequence of Thryssa kammalensis was determined. The mitochondrial genome is 16,884 bp in length, including 13 protein-coding genes, 2 ribosomal RNAs (rRNAs), 22 transfer RNAs (tRNAs), and a non-coding control region as those found in other verteb...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799547/ https://www.ncbi.nlm.nih.gov/pubmed/33473473 http://dx.doi.org/10.1080/23802359.2016.1167637 |
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author | Zhao, Liangjie Liu, Qigen |
author_facet | Zhao, Liangjie Liu, Qigen |
author_sort | Zhao, Liangjie |
collection | PubMed |
description | In this paper, the complete mitochondrial DNA (mtDNA) sequence of Thryssa kammalensis was determined. The mitochondrial genome is 16,884 bp in length, including 13 protein-coding genes, 2 ribosomal RNAs (rRNAs), 22 transfer RNAs (tRNAs), and a non-coding control region as those found in other vertebrates, with the gene identical to that of typical vertebrates. The overall base composition of the heavy strand is 31.07% A, 24.82% T, 28.33% C, and 15.78% G, with an AT bias of 55.89%. Phylogeny of T. kammalensis suggested more close relationship with Lycothrissa crocodilus and Setipinna taty. The complete mitogenome of this species can provide a basic data for the studies on population history, molecular systematics, phylogeography, stock evaluation, and conservation genetics. |
format | Online Article Text |
id | pubmed-7799547 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77995472021-01-19 Complete mitochondrial genome sequence of Thryssa kammalensis (Clupeiformes, Engraulidae) Zhao, Liangjie Liu, Qigen Mitochondrial DNA B Resour Mitogenome Announcement In this paper, the complete mitochondrial DNA (mtDNA) sequence of Thryssa kammalensis was determined. The mitochondrial genome is 16,884 bp in length, including 13 protein-coding genes, 2 ribosomal RNAs (rRNAs), 22 transfer RNAs (tRNAs), and a non-coding control region as those found in other vertebrates, with the gene identical to that of typical vertebrates. The overall base composition of the heavy strand is 31.07% A, 24.82% T, 28.33% C, and 15.78% G, with an AT bias of 55.89%. Phylogeny of T. kammalensis suggested more close relationship with Lycothrissa crocodilus and Setipinna taty. The complete mitogenome of this species can provide a basic data for the studies on population history, molecular systematics, phylogeography, stock evaluation, and conservation genetics. Taylor & Francis 2016-04-19 /pmc/articles/PMC7799547/ /pubmed/33473473 http://dx.doi.org/10.1080/23802359.2016.1167637 Text en © 2016 The Author(s). Published by Taylor & Francis. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Zhao, Liangjie Liu, Qigen Complete mitochondrial genome sequence of Thryssa kammalensis (Clupeiformes, Engraulidae) |
title | Complete mitochondrial genome sequence of Thryssa kammalensis (Clupeiformes, Engraulidae) |
title_full | Complete mitochondrial genome sequence of Thryssa kammalensis (Clupeiformes, Engraulidae) |
title_fullStr | Complete mitochondrial genome sequence of Thryssa kammalensis (Clupeiformes, Engraulidae) |
title_full_unstemmed | Complete mitochondrial genome sequence of Thryssa kammalensis (Clupeiformes, Engraulidae) |
title_short | Complete mitochondrial genome sequence of Thryssa kammalensis (Clupeiformes, Engraulidae) |
title_sort | complete mitochondrial genome sequence of thryssa kammalensis (clupeiformes, engraulidae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799547/ https://www.ncbi.nlm.nih.gov/pubmed/33473473 http://dx.doi.org/10.1080/23802359.2016.1167637 |
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