Cargando…

Characterization of the complete mitochondrial genome of the endangered species Schizothorax integrilabiatus

Schizothorax integrilabiatus is an endangered fish species found in the Buqun Lake of Qinghai-Tibet Plateau. In this study, we determined the complete mitochondrial genome sequence of the S. integrilabiatus. The circular mitochondrial genome was 16,621 bp in length, containing 13 protein-coding gene...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhang, Chi, Ma, Bo, Gyurmey, Mey, Liu, Haiping, Wang, Wanliang, Li, Baohai, Zhang, Bianbian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799548/
https://www.ncbi.nlm.nih.gov/pubmed/33474155
http://dx.doi.org/10.1080/23802359.2018.1445486
_version_ 1783635152705945600
author Zhang, Chi
Ma, Bo
Gyurmey, Mey
Liu, Haiping
Wang, Wanliang
Li, Baohai
Zhang, Bianbian
author_facet Zhang, Chi
Ma, Bo
Gyurmey, Mey
Liu, Haiping
Wang, Wanliang
Li, Baohai
Zhang, Bianbian
author_sort Zhang, Chi
collection PubMed
description Schizothorax integrilabiatus is an endangered fish species found in the Buqun Lake of Qinghai-Tibet Plateau. In this study, we determined the complete mitochondrial genome sequence of the S. integrilabiatus. The circular mitochondrial genome was 16,621 bp in length, containing 13 protein-coding genes (PCGs), 22 transfer RNA (tRNA) genes, two ribosomal RNA (rRNA) genes and a control region (D-loop). The overall base composition is A 30.1%, C 26.9%, G 17.4%, and T 25.6%, with a high A + T content (55.7%). Further, phylogenetic analysis suggested that S. integrilabiatus is closely related to species of S. plagiostomus, and then clustered into a clade with other Schizothoracinae species. This work provides additional molecular information for studying S. integrilabiatus conservation genetics and evolutionary relationships.
format Online
Article
Text
id pubmed-7799548
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77995482021-01-19 Characterization of the complete mitochondrial genome of the endangered species Schizothorax integrilabiatus Zhang, Chi Ma, Bo Gyurmey, Mey Liu, Haiping Wang, Wanliang Li, Baohai Zhang, Bianbian Mitochondrial DNA B Resour Mitogenome Announcement Schizothorax integrilabiatus is an endangered fish species found in the Buqun Lake of Qinghai-Tibet Plateau. In this study, we determined the complete mitochondrial genome sequence of the S. integrilabiatus. The circular mitochondrial genome was 16,621 bp in length, containing 13 protein-coding genes (PCGs), 22 transfer RNA (tRNA) genes, two ribosomal RNA (rRNA) genes and a control region (D-loop). The overall base composition is A 30.1%, C 26.9%, G 17.4%, and T 25.6%, with a high A + T content (55.7%). Further, phylogenetic analysis suggested that S. integrilabiatus is closely related to species of S. plagiostomus, and then clustered into a clade with other Schizothoracinae species. This work provides additional molecular information for studying S. integrilabiatus conservation genetics and evolutionary relationships. Taylor & Francis 2018-02-28 /pmc/articles/PMC7799548/ /pubmed/33474155 http://dx.doi.org/10.1080/23802359.2018.1445486 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Zhang, Chi
Ma, Bo
Gyurmey, Mey
Liu, Haiping
Wang, Wanliang
Li, Baohai
Zhang, Bianbian
Characterization of the complete mitochondrial genome of the endangered species Schizothorax integrilabiatus
title Characterization of the complete mitochondrial genome of the endangered species Schizothorax integrilabiatus
title_full Characterization of the complete mitochondrial genome of the endangered species Schizothorax integrilabiatus
title_fullStr Characterization of the complete mitochondrial genome of the endangered species Schizothorax integrilabiatus
title_full_unstemmed Characterization of the complete mitochondrial genome of the endangered species Schizothorax integrilabiatus
title_short Characterization of the complete mitochondrial genome of the endangered species Schizothorax integrilabiatus
title_sort characterization of the complete mitochondrial genome of the endangered species schizothorax integrilabiatus
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799548/
https://www.ncbi.nlm.nih.gov/pubmed/33474155
http://dx.doi.org/10.1080/23802359.2018.1445486
work_keys_str_mv AT zhangchi characterizationofthecompletemitochondrialgenomeoftheendangeredspeciesschizothoraxintegrilabiatus
AT mabo characterizationofthecompletemitochondrialgenomeoftheendangeredspeciesschizothoraxintegrilabiatus
AT gyurmeymey characterizationofthecompletemitochondrialgenomeoftheendangeredspeciesschizothoraxintegrilabiatus
AT liuhaiping characterizationofthecompletemitochondrialgenomeoftheendangeredspeciesschizothoraxintegrilabiatus
AT wangwanliang characterizationofthecompletemitochondrialgenomeoftheendangeredspeciesschizothoraxintegrilabiatus
AT libaohai characterizationofthecompletemitochondrialgenomeoftheendangeredspeciesschizothoraxintegrilabiatus
AT zhangbianbian characterizationofthecompletemitochondrialgenomeoftheendangeredspeciesschizothoraxintegrilabiatus