The complete mitochondrial genome and phylogenetic position of the leopard catshark, Poroderma pantherinum

We present the first mitochondrial genome of a South African endemic catshark, Poroderma pantherinum. The complete mitogenome is 16,686 bp in length, comprising 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes, and one non-coding control region. Similar to other shark mitogenomes, it is AT rich...

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Autores principales: van Staden, Michaela, Gledhill, Katie S., Rhode, Clint, Bester-van der Merwe, Aletta E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799560/
https://www.ncbi.nlm.nih.gov/pubmed/33474310
http://dx.doi.org/10.1080/23802359.2018.1483772
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author van Staden, Michaela
Gledhill, Katie S.
Rhode, Clint
Bester-van der Merwe, Aletta E.
author_facet van Staden, Michaela
Gledhill, Katie S.
Rhode, Clint
Bester-van der Merwe, Aletta E.
author_sort van Staden, Michaela
collection PubMed
description We present the first mitochondrial genome of a South African endemic catshark, Poroderma pantherinum. The complete mitogenome is 16,686 bp in length, comprising 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes, and one non-coding control region. Similar to other shark mitogenomes, it is AT rich (61.1%), with a GC content of 38.9%. Protein-coding genes used one of two start codons (ATG and GTG) and one stop codon (TAA/TA-/T-). Phylogenetic analysis of the leopard catshark and 34 carcharhinid species showed that it clusters with two other scyliorhinid species (Cephaloscyllium umbratile and Scyliorhinus canicula) with 100% support.
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spelling pubmed-77995602021-01-19 The complete mitochondrial genome and phylogenetic position of the leopard catshark, Poroderma pantherinum van Staden, Michaela Gledhill, Katie S. Rhode, Clint Bester-van der Merwe, Aletta E. Mitochondrial DNA B Resour Mitogenome Announcement We present the first mitochondrial genome of a South African endemic catshark, Poroderma pantherinum. The complete mitogenome is 16,686 bp in length, comprising 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes, and one non-coding control region. Similar to other shark mitogenomes, it is AT rich (61.1%), with a GC content of 38.9%. Protein-coding genes used one of two start codons (ATG and GTG) and one stop codon (TAA/TA-/T-). Phylogenetic analysis of the leopard catshark and 34 carcharhinid species showed that it clusters with two other scyliorhinid species (Cephaloscyllium umbratile and Scyliorhinus canicula) with 100% support. Taylor & Francis 2018-07-10 /pmc/articles/PMC7799560/ /pubmed/33474310 http://dx.doi.org/10.1080/23802359.2018.1483772 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
van Staden, Michaela
Gledhill, Katie S.
Rhode, Clint
Bester-van der Merwe, Aletta E.
The complete mitochondrial genome and phylogenetic position of the leopard catshark, Poroderma pantherinum
title The complete mitochondrial genome and phylogenetic position of the leopard catshark, Poroderma pantherinum
title_full The complete mitochondrial genome and phylogenetic position of the leopard catshark, Poroderma pantherinum
title_fullStr The complete mitochondrial genome and phylogenetic position of the leopard catshark, Poroderma pantherinum
title_full_unstemmed The complete mitochondrial genome and phylogenetic position of the leopard catshark, Poroderma pantherinum
title_short The complete mitochondrial genome and phylogenetic position of the leopard catshark, Poroderma pantherinum
title_sort complete mitochondrial genome and phylogenetic position of the leopard catshark, poroderma pantherinum
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799560/
https://www.ncbi.nlm.nih.gov/pubmed/33474310
http://dx.doi.org/10.1080/23802359.2018.1483772
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