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Genetype and phylogenomic position of the frilled shark Chlamydoselachus anguineus inferred from the mitochondrial genome
The genetype of Chlamydoselachus anguineus from Australian waters is described using the whole mitochondrial genome obtained from Illumina NGS technology. Total length of the mitogenome is 17 313 bp, consisting of 2 rRNAs, 13 protein-coding genes, 22 tRNA genes and 2 non-coding regions thus updating...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799599/ https://www.ncbi.nlm.nih.gov/pubmed/33473392 http://dx.doi.org/10.1080/23802359.2015.1137801 |
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author | Bustamante, Carlos Bennett, Michael B. Ovenden, Jennifer R. |
author_facet | Bustamante, Carlos Bennett, Michael B. Ovenden, Jennifer R. |
author_sort | Bustamante, Carlos |
collection | PubMed |
description | The genetype of Chlamydoselachus anguineus from Australian waters is described using the whole mitochondrial genome obtained from Illumina NGS technology. Total length of the mitogenome is 17 313 bp, consisting of 2 rRNAs, 13 protein-coding genes, 22 tRNA genes and 2 non-coding regions thus updating the previously available mitogenome for this species. The phylogenomic reconstruction comprising all available species of Superorder Squalomorphi supports the inclusion of C. anguineus in a divergent clade inside Order Hexanchiformes. Phyletic relationships inferred from the whole mitochondrial genomes are in agreement with traditional taxonomy. The low divergence between C. anguineus genomes (>99.9% genetic identity) is consistent with a widespread population in the west Pacific Ocean. |
format | Online Article Text |
id | pubmed-7799599 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77995992021-01-19 Genetype and phylogenomic position of the frilled shark Chlamydoselachus anguineus inferred from the mitochondrial genome Bustamante, Carlos Bennett, Michael B. Ovenden, Jennifer R. Mitochondrial DNA B Resour Mitogenome Announcement The genetype of Chlamydoselachus anguineus from Australian waters is described using the whole mitochondrial genome obtained from Illumina NGS technology. Total length of the mitogenome is 17 313 bp, consisting of 2 rRNAs, 13 protein-coding genes, 22 tRNA genes and 2 non-coding regions thus updating the previously available mitogenome for this species. The phylogenomic reconstruction comprising all available species of Superorder Squalomorphi supports the inclusion of C. anguineus in a divergent clade inside Order Hexanchiformes. Phyletic relationships inferred from the whole mitochondrial genomes are in agreement with traditional taxonomy. The low divergence between C. anguineus genomes (>99.9% genetic identity) is consistent with a widespread population in the west Pacific Ocean. Taylor & Francis 2016-02-01 /pmc/articles/PMC7799599/ /pubmed/33473392 http://dx.doi.org/10.1080/23802359.2015.1137801 Text en © 2016 The Author(s). Published by Taylor & Francis. http://creativecommons.org/Licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/Licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/Licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Bustamante, Carlos Bennett, Michael B. Ovenden, Jennifer R. Genetype and phylogenomic position of the frilled shark Chlamydoselachus anguineus inferred from the mitochondrial genome |
title | Genetype and phylogenomic position of the frilled shark Chlamydoselachus anguineus inferred from the mitochondrial genome |
title_full | Genetype and phylogenomic position of the frilled shark Chlamydoselachus anguineus inferred from the mitochondrial genome |
title_fullStr | Genetype and phylogenomic position of the frilled shark Chlamydoselachus anguineus inferred from the mitochondrial genome |
title_full_unstemmed | Genetype and phylogenomic position of the frilled shark Chlamydoselachus anguineus inferred from the mitochondrial genome |
title_short | Genetype and phylogenomic position of the frilled shark Chlamydoselachus anguineus inferred from the mitochondrial genome |
title_sort | genetype and phylogenomic position of the frilled shark chlamydoselachus anguineus inferred from the mitochondrial genome |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799599/ https://www.ncbi.nlm.nih.gov/pubmed/33473392 http://dx.doi.org/10.1080/23802359.2015.1137801 |
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