The complete mitochondrial genomes of two talitrid amphipods, Platorchestia japonica and P. parapacifica (Crustacea, Amphipoda)

In this paper, we determined the complete mitochondrial genome (mitogenome) sequences of two talitrid amphipods, Platorchestia japonica and P. parapacifica. The complete mitogenomes of P. japonica and P. parapacifica were 14,780 and 14,787 bp in length, respectively, with the typical 13 protein codi...

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Autores principales: Yang, Hee-Min, Song, Ji-Hun, Kim, Min-Seop, Min, Gi-Sik
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2017
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799624/
https://www.ncbi.nlm.nih.gov/pubmed/33473971
http://dx.doi.org/10.1080/23802359.2017.1398606
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author Yang, Hee-Min
Song, Ji-Hun
Kim, Min-Seop
Min, Gi-Sik
author_facet Yang, Hee-Min
Song, Ji-Hun
Kim, Min-Seop
Min, Gi-Sik
author_sort Yang, Hee-Min
collection PubMed
description In this paper, we determined the complete mitochondrial genome (mitogenome) sequences of two talitrid amphipods, Platorchestia japonica and P. parapacifica. The complete mitogenomes of P. japonica and P. parapacifica were 14,780 and 14,787 bp in length, respectively, with the typical 13 protein coding genes (PCGs), 22 transfer RNAs (tRNAs), two ribosomal RNAs (rRNAs) and a control region (CR). In the gene order analysis, two PCGs (nad3 and nad6) were rearranged in comparison to the typical pan-crustacean ground pattern. A maximum-likelihood tree, constructed based on 31 eumalacostracan mitogenomes, confirmed that P. japonica and P. parapacifica (Talitridae) were closely related to Parhyale hawaiensis (Hyalidae), and supports the monophyly of the superfamily Talitroidea.
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spelling pubmed-77996242021-01-19 The complete mitochondrial genomes of two talitrid amphipods, Platorchestia japonica and P. parapacifica (Crustacea, Amphipoda) Yang, Hee-Min Song, Ji-Hun Kim, Min-Seop Min, Gi-Sik Mitochondrial DNA B Resour Mitogenome Announcement In this paper, we determined the complete mitochondrial genome (mitogenome) sequences of two talitrid amphipods, Platorchestia japonica and P. parapacifica. The complete mitogenomes of P. japonica and P. parapacifica were 14,780 and 14,787 bp in length, respectively, with the typical 13 protein coding genes (PCGs), 22 transfer RNAs (tRNAs), two ribosomal RNAs (rRNAs) and a control region (CR). In the gene order analysis, two PCGs (nad3 and nad6) were rearranged in comparison to the typical pan-crustacean ground pattern. A maximum-likelihood tree, constructed based on 31 eumalacostracan mitogenomes, confirmed that P. japonica and P. parapacifica (Talitridae) were closely related to Parhyale hawaiensis (Hyalidae), and supports the monophyly of the superfamily Talitroidea. Taylor & Francis 2017-11-06 /pmc/articles/PMC7799624/ /pubmed/33473971 http://dx.doi.org/10.1080/23802359.2017.1398606 Text en © 2017 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Yang, Hee-Min
Song, Ji-Hun
Kim, Min-Seop
Min, Gi-Sik
The complete mitochondrial genomes of two talitrid amphipods, Platorchestia japonica and P. parapacifica (Crustacea, Amphipoda)
title The complete mitochondrial genomes of two talitrid amphipods, Platorchestia japonica and P. parapacifica (Crustacea, Amphipoda)
title_full The complete mitochondrial genomes of two talitrid amphipods, Platorchestia japonica and P. parapacifica (Crustacea, Amphipoda)
title_fullStr The complete mitochondrial genomes of two talitrid amphipods, Platorchestia japonica and P. parapacifica (Crustacea, Amphipoda)
title_full_unstemmed The complete mitochondrial genomes of two talitrid amphipods, Platorchestia japonica and P. parapacifica (Crustacea, Amphipoda)
title_short The complete mitochondrial genomes of two talitrid amphipods, Platorchestia japonica and P. parapacifica (Crustacea, Amphipoda)
title_sort complete mitochondrial genomes of two talitrid amphipods, platorchestia japonica and p. parapacifica (crustacea, amphipoda)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799624/
https://www.ncbi.nlm.nih.gov/pubmed/33473971
http://dx.doi.org/10.1080/23802359.2017.1398606
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