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Inheritance and phylogenetic analysis of Tylosurus acus melanotus based on the complete mitochondrial genomes

In our research, 17 sets of primers were used to amplify contiguous, overlapping segments of the complete mitochondrial DNA (mtDNA) of the Tylosurus acus melanotus in order to analyse the inheritance and evolutionary relationship of this species. The total length of the mitochondrial genome is 16,72...

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Autores principales: Zhang, Hong, Zeng, Da, Xu, Youhou, Zhang, Yanqiu, Fang, Huaiyi, Xu, Lili, Gong, Bin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799640/
https://www.ncbi.nlm.nih.gov/pubmed/33473526
http://dx.doi.org/10.1080/23802359.2016.1180551
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author Zhang, Hong
Zeng, Da
Xu, Youhou
Zhang, Yanqiu
Fang, Huaiyi
Xu, Lili
Gong, Bin
author_facet Zhang, Hong
Zeng, Da
Xu, Youhou
Zhang, Yanqiu
Fang, Huaiyi
Xu, Lili
Gong, Bin
author_sort Zhang, Hong
collection PubMed
description In our research, 17 sets of primers were used to amplify contiguous, overlapping segments of the complete mitochondrial DNA (mtDNA) of the Tylosurus acus melanotus in order to analyse the inheritance and evolutionary relationship of this species. The total length of the mitochondrial genome is 16,723 bp and deposited in the GenBank with accession numbers KU605633. The gene arrangement was similar to other bony fishes which contained 37 genes (13 protein-coding genes, 2 ribosomal RNA and 22 transfer RNAs) and a major non-coding control region. Most genes were encoded on the H-strand, except for the ND6 and 8 tRNA genes, encoding on the L-strand. The mtDNA may provide some important genetic background information for this valuable fish. The nucleotide skewness for the coding strands of T. acus melanotus (GC-skew = −0.21) is biased towards G and the negative GC-skew ranges from -0.53(ATP8) to -0.12(CO2) and the AT-Skew showed more positive varying from −0.17(ND3) to 0.26(ATP6). The phylogenetic analysis demonstrated that T. acus melanotus was clustered together with Ablennes hians, but far away from Cololabis saira which belongs to Beloniformes, Belonidae.
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spelling pubmed-77996402021-01-19 Inheritance and phylogenetic analysis of Tylosurus acus melanotus based on the complete mitochondrial genomes Zhang, Hong Zeng, Da Xu, Youhou Zhang, Yanqiu Fang, Huaiyi Xu, Lili Gong, Bin Mitochondrial DNA B Resour Mitogenome Announcement In our research, 17 sets of primers were used to amplify contiguous, overlapping segments of the complete mitochondrial DNA (mtDNA) of the Tylosurus acus melanotus in order to analyse the inheritance and evolutionary relationship of this species. The total length of the mitochondrial genome is 16,723 bp and deposited in the GenBank with accession numbers KU605633. The gene arrangement was similar to other bony fishes which contained 37 genes (13 protein-coding genes, 2 ribosomal RNA and 22 transfer RNAs) and a major non-coding control region. Most genes were encoded on the H-strand, except for the ND6 and 8 tRNA genes, encoding on the L-strand. The mtDNA may provide some important genetic background information for this valuable fish. The nucleotide skewness for the coding strands of T. acus melanotus (GC-skew = −0.21) is biased towards G and the negative GC-skew ranges from -0.53(ATP8) to -0.12(CO2) and the AT-Skew showed more positive varying from −0.17(ND3) to 0.26(ATP6). The phylogenetic analysis demonstrated that T. acus melanotus was clustered together with Ablennes hians, but far away from Cololabis saira which belongs to Beloniformes, Belonidae. Taylor & Francis 2016-07-10 /pmc/articles/PMC7799640/ /pubmed/33473526 http://dx.doi.org/10.1080/23802359.2016.1180551 Text en © 2016 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Zhang, Hong
Zeng, Da
Xu, Youhou
Zhang, Yanqiu
Fang, Huaiyi
Xu, Lili
Gong, Bin
Inheritance and phylogenetic analysis of Tylosurus acus melanotus based on the complete mitochondrial genomes
title Inheritance and phylogenetic analysis of Tylosurus acus melanotus based on the complete mitochondrial genomes
title_full Inheritance and phylogenetic analysis of Tylosurus acus melanotus based on the complete mitochondrial genomes
title_fullStr Inheritance and phylogenetic analysis of Tylosurus acus melanotus based on the complete mitochondrial genomes
title_full_unstemmed Inheritance and phylogenetic analysis of Tylosurus acus melanotus based on the complete mitochondrial genomes
title_short Inheritance and phylogenetic analysis of Tylosurus acus melanotus based on the complete mitochondrial genomes
title_sort inheritance and phylogenetic analysis of tylosurus acus melanotus based on the complete mitochondrial genomes
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799640/
https://www.ncbi.nlm.nih.gov/pubmed/33473526
http://dx.doi.org/10.1080/23802359.2016.1180551
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