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Characterization of the complete mitochondrial genome of the lung fluke, Paragonimus kellicotti
In this study, the complete mitochondrial genome of human lung fluke, Paragonimus kellicotti, was recovered through Illumina sequencing data. This complete mitochondrial genome of P. kellicotti is 13,927 bp in length and has a base composition of A (16.6%), T (41.8%), C (13.%), and G (28.4%), demons...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799645/ https://www.ncbi.nlm.nih.gov/pubmed/33474294 http://dx.doi.org/10.1080/23802359.2018.1483763 |
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author | Wang, Tao Wang, Yunfang Xu, Fengqiang Li, Xia Qu, Rui Song, Lin Tang, Yongping Lin, Peilin |
author_facet | Wang, Tao Wang, Yunfang Xu, Fengqiang Li, Xia Qu, Rui Song, Lin Tang, Yongping Lin, Peilin |
author_sort | Wang, Tao |
collection | PubMed |
description | In this study, the complete mitochondrial genome of human lung fluke, Paragonimus kellicotti, was recovered through Illumina sequencing data. This complete mitochondrial genome of P. kellicotti is 13,927 bp in length and has a base composition of A (16.6%), T (41.8%), C (13.%), and G (28.4%), demonstrating an obvious bias of high AT content (58.4%). The mitochondrial genome contains a typically conserved structure, encoding 12 protein-coding genes (PCGs), 22 transfer RNA genes (tRNA), 2 ribosomal RNA genes (12S rRNA and 16S rRNA), and a control region (D-loop region). All PCGs were located on the H-strand. ND4 gene and ND4L gene were overlapped by 39 bp. The nucleotide sequence of 12 PCGs of P. heterotremus and other 10 parasite species were used for phylogenetic analysis. The result indicated P. heterotremus a relative close relationship with species P. westermani (AF219379.2). |
format | Online Article Text |
id | pubmed-7799645 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77996452021-01-19 Characterization of the complete mitochondrial genome of the lung fluke, Paragonimus kellicotti Wang, Tao Wang, Yunfang Xu, Fengqiang Li, Xia Qu, Rui Song, Lin Tang, Yongping Lin, Peilin Mitochondrial DNA B Resour Mitogenome Announcement In this study, the complete mitochondrial genome of human lung fluke, Paragonimus kellicotti, was recovered through Illumina sequencing data. This complete mitochondrial genome of P. kellicotti is 13,927 bp in length and has a base composition of A (16.6%), T (41.8%), C (13.%), and G (28.4%), demonstrating an obvious bias of high AT content (58.4%). The mitochondrial genome contains a typically conserved structure, encoding 12 protein-coding genes (PCGs), 22 transfer RNA genes (tRNA), 2 ribosomal RNA genes (12S rRNA and 16S rRNA), and a control region (D-loop region). All PCGs were located on the H-strand. ND4 gene and ND4L gene were overlapped by 39 bp. The nucleotide sequence of 12 PCGs of P. heterotremus and other 10 parasite species were used for phylogenetic analysis. The result indicated P. heterotremus a relative close relationship with species P. westermani (AF219379.2). Taylor & Francis 2018-06-26 /pmc/articles/PMC7799645/ /pubmed/33474294 http://dx.doi.org/10.1080/23802359.2018.1483763 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Wang, Tao Wang, Yunfang Xu, Fengqiang Li, Xia Qu, Rui Song, Lin Tang, Yongping Lin, Peilin Characterization of the complete mitochondrial genome of the lung fluke, Paragonimus kellicotti |
title | Characterization of the complete mitochondrial genome of the lung fluke, Paragonimus kellicotti |
title_full | Characterization of the complete mitochondrial genome of the lung fluke, Paragonimus kellicotti |
title_fullStr | Characterization of the complete mitochondrial genome of the lung fluke, Paragonimus kellicotti |
title_full_unstemmed | Characterization of the complete mitochondrial genome of the lung fluke, Paragonimus kellicotti |
title_short | Characterization of the complete mitochondrial genome of the lung fluke, Paragonimus kellicotti |
title_sort | characterization of the complete mitochondrial genome of the lung fluke, paragonimus kellicotti |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799645/ https://www.ncbi.nlm.nih.gov/pubmed/33474294 http://dx.doi.org/10.1080/23802359.2018.1483763 |
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