The complete chloroplast genome sequence of the Cucurbita pepo L. (Cucurbitaceae)

Cucurbita pepo is an important economic plant cultivated widely in the world. The complete chloroplast genome sequence of C. pepo is reported here. The genome is 157,343 bp in length and exhibits a typical quadripartite structure of the large (LSC, 87,970 bp) and small (SSC, 18,167 bp) single-copy r...

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Autores principales: Zhang, Chen, Zhu, Qianglong, Liu, Shi, Gao, Peng, Zhu, Zicheng, Wang, Xuezheng, Luan, Feishi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799668/
https://www.ncbi.nlm.nih.gov/pubmed/33474295
http://dx.doi.org/10.1080/23802359.2018.1483766
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author Zhang, Chen
Zhu, Qianglong
Liu, Shi
Gao, Peng
Zhu, Zicheng
Wang, Xuezheng
Luan, Feishi
author_facet Zhang, Chen
Zhu, Qianglong
Liu, Shi
Gao, Peng
Zhu, Zicheng
Wang, Xuezheng
Luan, Feishi
author_sort Zhang, Chen
collection PubMed
description Cucurbita pepo is an important economic plant cultivated widely in the world. The complete chloroplast genome sequence of C. pepo is reported here. The genome is 157,343 bp in length and exhibits a typical quadripartite structure of the large (LSC, 87,970 bp) and small (SSC, 18,167 bp) single-copy regions, separated by a pair of inverted repeats (IRs, 25,603 bp). A total of 131 genes were predicted including 85 protein-coding genes, eight rRNA genes and 38 tRNA genes. Further, phylogenetic analysis showed that C. pepo were closely related to other species in the family Cucurbitaceae. The complete chloroplast genome of C. pepo would be taken as a useful molecular tool for species discrimination, taxonomy, and phylogenetic relationships in the family Cucurbitaceae.
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spelling pubmed-77996682021-01-19 The complete chloroplast genome sequence of the Cucurbita pepo L. (Cucurbitaceae) Zhang, Chen Zhu, Qianglong Liu, Shi Gao, Peng Zhu, Zicheng Wang, Xuezheng Luan, Feishi Mitochondrial DNA B Resour Mitogenome Announcement Cucurbita pepo is an important economic plant cultivated widely in the world. The complete chloroplast genome sequence of C. pepo is reported here. The genome is 157,343 bp in length and exhibits a typical quadripartite structure of the large (LSC, 87,970 bp) and small (SSC, 18,167 bp) single-copy regions, separated by a pair of inverted repeats (IRs, 25,603 bp). A total of 131 genes were predicted including 85 protein-coding genes, eight rRNA genes and 38 tRNA genes. Further, phylogenetic analysis showed that C. pepo were closely related to other species in the family Cucurbitaceae. The complete chloroplast genome of C. pepo would be taken as a useful molecular tool for species discrimination, taxonomy, and phylogenetic relationships in the family Cucurbitaceae. Taylor & Francis 2018-06-29 /pmc/articles/PMC7799668/ /pubmed/33474295 http://dx.doi.org/10.1080/23802359.2018.1483766 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Zhang, Chen
Zhu, Qianglong
Liu, Shi
Gao, Peng
Zhu, Zicheng
Wang, Xuezheng
Luan, Feishi
The complete chloroplast genome sequence of the Cucurbita pepo L. (Cucurbitaceae)
title The complete chloroplast genome sequence of the Cucurbita pepo L. (Cucurbitaceae)
title_full The complete chloroplast genome sequence of the Cucurbita pepo L. (Cucurbitaceae)
title_fullStr The complete chloroplast genome sequence of the Cucurbita pepo L. (Cucurbitaceae)
title_full_unstemmed The complete chloroplast genome sequence of the Cucurbita pepo L. (Cucurbitaceae)
title_short The complete chloroplast genome sequence of the Cucurbita pepo L. (Cucurbitaceae)
title_sort complete chloroplast genome sequence of the cucurbita pepo l. (cucurbitaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799668/
https://www.ncbi.nlm.nih.gov/pubmed/33474295
http://dx.doi.org/10.1080/23802359.2018.1483766
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