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The complete chloroplast genome sequence of Korean raspberry Rubus crataegifolius (Rosaceae)
The first complete chloroplast genome sequences of Korean raspberry, oriental herbal medicinal plant of Korea, were reported in this study. The genome size was 155,714 bp, composed with one pair of inverted repeats (IRs) of 25,781 bp, which were separated by one large single copy (LSC; 85,402 bp) an...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799692/ https://www.ncbi.nlm.nih.gov/pubmed/33473983 http://dx.doi.org/10.1080/23802359.2017.1398621 |
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author | Yang, Ji Young Pak, Jae-Hong Kim, Seung-Chul |
author_facet | Yang, Ji Young Pak, Jae-Hong Kim, Seung-Chul |
author_sort | Yang, Ji Young |
collection | PubMed |
description | The first complete chloroplast genome sequences of Korean raspberry, oriental herbal medicinal plant of Korea, were reported in this study. The genome size was 155,714 bp, composed with one pair of inverted repeats (IRs) of 25,781 bp, which were separated by one large single copy (LSC; 85,402 bp) and one small single copy (SSC; 18,750 bp). The genome contained 131 genes, coding for 86 proteins, eight ribosomal RNAs, and 37 transfer RNAs. The overall GC content was 37.1%. Phylogenetic analysis suggests that R. crataegifolius is sister to R. corchorifolius, which belongs to subgenus Idaeobatus. |
format | Online Article Text |
id | pubmed-7799692 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77996922021-01-19 The complete chloroplast genome sequence of Korean raspberry Rubus crataegifolius (Rosaceae) Yang, Ji Young Pak, Jae-Hong Kim, Seung-Chul Mitochondrial DNA B Resour Mitogenome Announcement The first complete chloroplast genome sequences of Korean raspberry, oriental herbal medicinal plant of Korea, were reported in this study. The genome size was 155,714 bp, composed with one pair of inverted repeats (IRs) of 25,781 bp, which were separated by one large single copy (LSC; 85,402 bp) and one small single copy (SSC; 18,750 bp). The genome contained 131 genes, coding for 86 proteins, eight ribosomal RNAs, and 37 transfer RNAs. The overall GC content was 37.1%. Phylogenetic analysis suggests that R. crataegifolius is sister to R. corchorifolius, which belongs to subgenus Idaeobatus. Taylor & Francis 2017-11-07 /pmc/articles/PMC7799692/ /pubmed/33473983 http://dx.doi.org/10.1080/23802359.2017.1398621 Text en © 2017 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Yang, Ji Young Pak, Jae-Hong Kim, Seung-Chul The complete chloroplast genome sequence of Korean raspberry Rubus crataegifolius (Rosaceae) |
title | The complete chloroplast genome sequence of Korean raspberry Rubus crataegifolius (Rosaceae) |
title_full | The complete chloroplast genome sequence of Korean raspberry Rubus crataegifolius (Rosaceae) |
title_fullStr | The complete chloroplast genome sequence of Korean raspberry Rubus crataegifolius (Rosaceae) |
title_full_unstemmed | The complete chloroplast genome sequence of Korean raspberry Rubus crataegifolius (Rosaceae) |
title_short | The complete chloroplast genome sequence of Korean raspberry Rubus crataegifolius (Rosaceae) |
title_sort | complete chloroplast genome sequence of korean raspberry rubus crataegifolius (rosaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799692/ https://www.ncbi.nlm.nih.gov/pubmed/33473983 http://dx.doi.org/10.1080/23802359.2017.1398621 |
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