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Complete mitochondrial genome of darkfin hind Cephalopholis urodeta (Perciformes, Epinephelidae)
Darkfin hind, Cephalopholis urodeta, belongs to the subfamily Epinephelinae. It is one of the most important fish species in coral-reef ecosystem. In this study, the complete mitochondrial (mt) genome of C. urodeta has been determined. It was 16,592 bp in length and contained 13 protein-coding genes...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799697/ https://www.ncbi.nlm.nih.gov/pubmed/33473676 http://dx.doi.org/10.1080/23802359.2016.1214542 |
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author | Guo, Minglan Huang, Hui Gao, Yongli |
author_facet | Guo, Minglan Huang, Hui Gao, Yongli |
author_sort | Guo, Minglan |
collection | PubMed |
description | Darkfin hind, Cephalopholis urodeta, belongs to the subfamily Epinephelinae. It is one of the most important fish species in coral-reef ecosystem. In this study, the complete mitochondrial (mt) genome of C. urodeta has been determined. It was 16,592 bp in length and contained 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes and 2 non-coding regions. The mitogenome sequence of C. urodeta shared 94% and 92% similarity to that of C. sonnerati and C.sexmaculata, respectively. Phylogenetic tree was made based on the concatenated sequences of 12 protein-coding genes on mtH-strand. All the results provide insights into the evolution in the subfamily Epinephelinae. |
format | Online Article Text |
id | pubmed-7799697 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77996972021-01-19 Complete mitochondrial genome of darkfin hind Cephalopholis urodeta (Perciformes, Epinephelidae) Guo, Minglan Huang, Hui Gao, Yongli Mitochondrial DNA B Resour Mitogenome Announcement Darkfin hind, Cephalopholis urodeta, belongs to the subfamily Epinephelinae. It is one of the most important fish species in coral-reef ecosystem. In this study, the complete mitochondrial (mt) genome of C. urodeta has been determined. It was 16,592 bp in length and contained 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes and 2 non-coding regions. The mitogenome sequence of C. urodeta shared 94% and 92% similarity to that of C. sonnerati and C.sexmaculata, respectively. Phylogenetic tree was made based on the concatenated sequences of 12 protein-coding genes on mtH-strand. All the results provide insights into the evolution in the subfamily Epinephelinae. Taylor & Francis 2016-12-09 /pmc/articles/PMC7799697/ /pubmed/33473676 http://dx.doi.org/10.1080/23802359.2016.1214542 Text en © 2016 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Guo, Minglan Huang, Hui Gao, Yongli Complete mitochondrial genome of darkfin hind Cephalopholis urodeta (Perciformes, Epinephelidae) |
title | Complete mitochondrial genome of darkfin hind Cephalopholis urodeta (Perciformes, Epinephelidae) |
title_full | Complete mitochondrial genome of darkfin hind Cephalopholis urodeta (Perciformes, Epinephelidae) |
title_fullStr | Complete mitochondrial genome of darkfin hind Cephalopholis urodeta (Perciformes, Epinephelidae) |
title_full_unstemmed | Complete mitochondrial genome of darkfin hind Cephalopholis urodeta (Perciformes, Epinephelidae) |
title_short | Complete mitochondrial genome of darkfin hind Cephalopholis urodeta (Perciformes, Epinephelidae) |
title_sort | complete mitochondrial genome of darkfin hind cephalopholis urodeta (perciformes, epinephelidae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799697/ https://www.ncbi.nlm.nih.gov/pubmed/33473676 http://dx.doi.org/10.1080/23802359.2016.1214542 |
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