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The complete mitochondrial genome sequence of an alpine plant Arabis alpina

Arabis alpina (A. alpina) is an arctic-alpine flowering plant in the family Brassicaceae, naturally growing in the tundra of arctic regions and in mountains at southern latitudes. In this study, we first report the assembly of the complete A. alpina mitochondrial (mt) genome using the next-generatio...

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Autores principales: Xu, Yiqing, Bi, Changwei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799711/
https://www.ncbi.nlm.nih.gov/pubmed/33474299
http://dx.doi.org/10.1080/23802359.2018.1483758
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author Xu, Yiqing
Bi, Changwei
author_facet Xu, Yiqing
Bi, Changwei
author_sort Xu, Yiqing
collection PubMed
description Arabis alpina (A. alpina) is an arctic-alpine flowering plant in the family Brassicaceae, naturally growing in the tundra of arctic regions and in mountains at southern latitudes. In this study, we first report the assembly of the complete A. alpina mitochondrial (mt) genome using the next-generation sequencing technologies. The A. alpina mt circular genome is 323,159 bp in length and contains 33 protein-coding genes, 18 tRNA genes and 3 rRNA genes. To analyze the phylogenic and evolutional relationship of A. alpina, a neighbour-joining phylogenetic tree was reconstructed based on the mt genome of A. alpina and other 27 plants. The complete A. alpina mt genome will be helpful in population studies or investigations of mt functions of these alpine plant species.
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spelling pubmed-77997112021-01-19 The complete mitochondrial genome sequence of an alpine plant Arabis alpina Xu, Yiqing Bi, Changwei Mitochondrial DNA B Resour Mitogenome Announcement Arabis alpina (A. alpina) is an arctic-alpine flowering plant in the family Brassicaceae, naturally growing in the tundra of arctic regions and in mountains at southern latitudes. In this study, we first report the assembly of the complete A. alpina mitochondrial (mt) genome using the next-generation sequencing technologies. The A. alpina mt circular genome is 323,159 bp in length and contains 33 protein-coding genes, 18 tRNA genes and 3 rRNA genes. To analyze the phylogenic and evolutional relationship of A. alpina, a neighbour-joining phylogenetic tree was reconstructed based on the mt genome of A. alpina and other 27 plants. The complete A. alpina mt genome will be helpful in population studies or investigations of mt functions of these alpine plant species. Taylor & Francis 2018-06-29 /pmc/articles/PMC7799711/ /pubmed/33474299 http://dx.doi.org/10.1080/23802359.2018.1483758 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Xu, Yiqing
Bi, Changwei
The complete mitochondrial genome sequence of an alpine plant Arabis alpina
title The complete mitochondrial genome sequence of an alpine plant Arabis alpina
title_full The complete mitochondrial genome sequence of an alpine plant Arabis alpina
title_fullStr The complete mitochondrial genome sequence of an alpine plant Arabis alpina
title_full_unstemmed The complete mitochondrial genome sequence of an alpine plant Arabis alpina
title_short The complete mitochondrial genome sequence of an alpine plant Arabis alpina
title_sort complete mitochondrial genome sequence of an alpine plant arabis alpina
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799711/
https://www.ncbi.nlm.nih.gov/pubmed/33474299
http://dx.doi.org/10.1080/23802359.2018.1483758
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