Cargando…
The complete mitochondrial genome sequence of an alpine plant Arabis alpina
Arabis alpina (A. alpina) is an arctic-alpine flowering plant in the family Brassicaceae, naturally growing in the tundra of arctic regions and in mountains at southern latitudes. In this study, we first report the assembly of the complete A. alpina mitochondrial (mt) genome using the next-generatio...
Autores principales: | , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799711/ https://www.ncbi.nlm.nih.gov/pubmed/33474299 http://dx.doi.org/10.1080/23802359.2018.1483758 |
_version_ | 1783635189213167616 |
---|---|
author | Xu, Yiqing Bi, Changwei |
author_facet | Xu, Yiqing Bi, Changwei |
author_sort | Xu, Yiqing |
collection | PubMed |
description | Arabis alpina (A. alpina) is an arctic-alpine flowering plant in the family Brassicaceae, naturally growing in the tundra of arctic regions and in mountains at southern latitudes. In this study, we first report the assembly of the complete A. alpina mitochondrial (mt) genome using the next-generation sequencing technologies. The A. alpina mt circular genome is 323,159 bp in length and contains 33 protein-coding genes, 18 tRNA genes and 3 rRNA genes. To analyze the phylogenic and evolutional relationship of A. alpina, a neighbour-joining phylogenetic tree was reconstructed based on the mt genome of A. alpina and other 27 plants. The complete A. alpina mt genome will be helpful in population studies or investigations of mt functions of these alpine plant species. |
format | Online Article Text |
id | pubmed-7799711 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77997112021-01-19 The complete mitochondrial genome sequence of an alpine plant Arabis alpina Xu, Yiqing Bi, Changwei Mitochondrial DNA B Resour Mitogenome Announcement Arabis alpina (A. alpina) is an arctic-alpine flowering plant in the family Brassicaceae, naturally growing in the tundra of arctic regions and in mountains at southern latitudes. In this study, we first report the assembly of the complete A. alpina mitochondrial (mt) genome using the next-generation sequencing technologies. The A. alpina mt circular genome is 323,159 bp in length and contains 33 protein-coding genes, 18 tRNA genes and 3 rRNA genes. To analyze the phylogenic and evolutional relationship of A. alpina, a neighbour-joining phylogenetic tree was reconstructed based on the mt genome of A. alpina and other 27 plants. The complete A. alpina mt genome will be helpful in population studies or investigations of mt functions of these alpine plant species. Taylor & Francis 2018-06-29 /pmc/articles/PMC7799711/ /pubmed/33474299 http://dx.doi.org/10.1080/23802359.2018.1483758 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Xu, Yiqing Bi, Changwei The complete mitochondrial genome sequence of an alpine plant Arabis alpina |
title | The complete mitochondrial genome sequence of an alpine plant Arabis alpina |
title_full | The complete mitochondrial genome sequence of an alpine plant Arabis alpina |
title_fullStr | The complete mitochondrial genome sequence of an alpine plant Arabis alpina |
title_full_unstemmed | The complete mitochondrial genome sequence of an alpine plant Arabis alpina |
title_short | The complete mitochondrial genome sequence of an alpine plant Arabis alpina |
title_sort | complete mitochondrial genome sequence of an alpine plant arabis alpina |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799711/ https://www.ncbi.nlm.nih.gov/pubmed/33474299 http://dx.doi.org/10.1080/23802359.2018.1483758 |
work_keys_str_mv | AT xuyiqing thecompletemitochondrialgenomesequenceofanalpineplantarabisalpina AT bichangwei thecompletemitochondrialgenomesequenceofanalpineplantarabisalpina AT xuyiqing completemitochondrialgenomesequenceofanalpineplantarabisalpina AT bichangwei completemitochondrialgenomesequenceofanalpineplantarabisalpina |