Complete mitochondrial genome of Caranx equula (Perciformes, Carangidae): genome characterization and phylogenetic analysis

Caranx equula is an important marine fish which due to its commercial values. However, some wild populations of C. equula are in danger because of the overfishing and environmental pollution. In this study, the complete mitochondrial genome of C. equula was firstly determined. The complete mitochond...

Descripción completa

Detalles Bibliográficos
Autores principales: Sun, Yuena, Xu, Tianjun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799722/
https://www.ncbi.nlm.nih.gov/pubmed/33474323
http://dx.doi.org/10.1080/23802359.2018.1491333
_version_ 1783635191738138624
author Sun, Yuena
Xu, Tianjun
author_facet Sun, Yuena
Xu, Tianjun
author_sort Sun, Yuena
collection PubMed
description Caranx equula is an important marine fish which due to its commercial values. However, some wild populations of C. equula are in danger because of the overfishing and environmental pollution. In this study, the complete mitochondrial genome of C. equula was firstly determined. The complete mitochondrial genome is 16,607 base pairs in length, and contained 13 protein-coding genes and 2 ribosomal RNA genes, 22 tRNA genes and 2 main non-coding regions. Overall A + T content was 52.9%. In addition, a phylogenetic tree was constructed using the complete mitochondrial genome and showed that C. equula clustered in a clade and formed a sister relationship with Caranx ignobilis belonged to the family of Carangidae.
format Online
Article
Text
id pubmed-7799722
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77997222021-01-19 Complete mitochondrial genome of Caranx equula (Perciformes, Carangidae): genome characterization and phylogenetic analysis Sun, Yuena Xu, Tianjun Mitochondrial DNA B Resour Mitogenome Announcement Caranx equula is an important marine fish which due to its commercial values. However, some wild populations of C. equula are in danger because of the overfishing and environmental pollution. In this study, the complete mitochondrial genome of C. equula was firstly determined. The complete mitochondrial genome is 16,607 base pairs in length, and contained 13 protein-coding genes and 2 ribosomal RNA genes, 22 tRNA genes and 2 main non-coding regions. Overall A + T content was 52.9%. In addition, a phylogenetic tree was constructed using the complete mitochondrial genome and showed that C. equula clustered in a clade and formed a sister relationship with Caranx ignobilis belonged to the family of Carangidae. Taylor & Francis 2018-07-13 /pmc/articles/PMC7799722/ /pubmed/33474323 http://dx.doi.org/10.1080/23802359.2018.1491333 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Sun, Yuena
Xu, Tianjun
Complete mitochondrial genome of Caranx equula (Perciformes, Carangidae): genome characterization and phylogenetic analysis
title Complete mitochondrial genome of Caranx equula (Perciformes, Carangidae): genome characterization and phylogenetic analysis
title_full Complete mitochondrial genome of Caranx equula (Perciformes, Carangidae): genome characterization and phylogenetic analysis
title_fullStr Complete mitochondrial genome of Caranx equula (Perciformes, Carangidae): genome characterization and phylogenetic analysis
title_full_unstemmed Complete mitochondrial genome of Caranx equula (Perciformes, Carangidae): genome characterization and phylogenetic analysis
title_short Complete mitochondrial genome of Caranx equula (Perciformes, Carangidae): genome characterization and phylogenetic analysis
title_sort complete mitochondrial genome of caranx equula (perciformes, carangidae): genome characterization and phylogenetic analysis
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799722/
https://www.ncbi.nlm.nih.gov/pubmed/33474323
http://dx.doi.org/10.1080/23802359.2018.1491333
work_keys_str_mv AT sunyuena completemitochondrialgenomeofcaranxequulaperciformescarangidaegenomecharacterizationandphylogeneticanalysis
AT xutianjun completemitochondrialgenomeofcaranxequulaperciformescarangidaegenomecharacterizationandphylogeneticanalysis

Ejemplares similares