Cargando…

The complete mitochondrial genome of a medicinal fungus, Tolypocladium ophioglossoides

As part of a genome sequencing project for Tolypocladium ophioglossoides (T. ophioglossoides), a complete mitochondrial (mt) genome was assembled as a single circular dsDNA of 35,159 bp. Conserved genes including the large and small rRNA subunits, 25 tRNA and 15 protein-coding genes, were identified...

Descripción completa

Detalles Bibliográficos
Autores principales: Fangliang, Huang, Yongquan, Li, Xinai, Chen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799743/
https://www.ncbi.nlm.nih.gov/pubmed/33473728
http://dx.doi.org/10.1080/23802359.2017.1285208
_version_ 1783635196355018752
author Fangliang, Huang
Yongquan, Li
Xinai, Chen
author_facet Fangliang, Huang
Yongquan, Li
Xinai, Chen
author_sort Fangliang, Huang
collection PubMed
description As part of a genome sequencing project for Tolypocladium ophioglossoides (T. ophioglossoides), a complete mitochondrial (mt) genome was assembled as a single circular dsDNA of 35,159 bp. Conserved genes including the large and small rRNA subunits, 25 tRNA and 15 protein-coding genes, were identified. In addition, 4 non-conserved open reading frames (ncORFs) in the intergenic and intronic regions were also identified. Transcription analyses using RNA-seq validated the expression of most conserved genes and ncORFs. Seven introns (groups I and II) were found within conserved genes, accounting for 21% of the mitogenome. All structural genes are located on one strand and are apparently transcribed in one direction. The complete mt genomes of T. ophioglossoides would be useful for future investigation of genetics, evolution and clinical identification of Tolypocladium species.
format Online
Article
Text
id pubmed-7799743
institution National Center for Biotechnology Information
language English
publishDate 2017
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77997432021-01-19 The complete mitochondrial genome of a medicinal fungus, Tolypocladium ophioglossoides Fangliang, Huang Yongquan, Li Xinai, Chen Mitochondrial DNA B Resour Mitogenome Announcement As part of a genome sequencing project for Tolypocladium ophioglossoides (T. ophioglossoides), a complete mitochondrial (mt) genome was assembled as a single circular dsDNA of 35,159 bp. Conserved genes including the large and small rRNA subunits, 25 tRNA and 15 protein-coding genes, were identified. In addition, 4 non-conserved open reading frames (ncORFs) in the intergenic and intronic regions were also identified. Transcription analyses using RNA-seq validated the expression of most conserved genes and ncORFs. Seven introns (groups I and II) were found within conserved genes, accounting for 21% of the mitogenome. All structural genes are located on one strand and are apparently transcribed in one direction. The complete mt genomes of T. ophioglossoides would be useful for future investigation of genetics, evolution and clinical identification of Tolypocladium species. Taylor & Francis 2017-02-16 /pmc/articles/PMC7799743/ /pubmed/33473728 http://dx.doi.org/10.1080/23802359.2017.1285208 Text en © 2017 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Fangliang, Huang
Yongquan, Li
Xinai, Chen
The complete mitochondrial genome of a medicinal fungus, Tolypocladium ophioglossoides
title The complete mitochondrial genome of a medicinal fungus, Tolypocladium ophioglossoides
title_full The complete mitochondrial genome of a medicinal fungus, Tolypocladium ophioglossoides
title_fullStr The complete mitochondrial genome of a medicinal fungus, Tolypocladium ophioglossoides
title_full_unstemmed The complete mitochondrial genome of a medicinal fungus, Tolypocladium ophioglossoides
title_short The complete mitochondrial genome of a medicinal fungus, Tolypocladium ophioglossoides
title_sort complete mitochondrial genome of a medicinal fungus, tolypocladium ophioglossoides
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799743/
https://www.ncbi.nlm.nih.gov/pubmed/33473728
http://dx.doi.org/10.1080/23802359.2017.1285208
work_keys_str_mv AT fanglianghuang thecompletemitochondrialgenomeofamedicinalfungustolypocladiumophioglossoides
AT yongquanli thecompletemitochondrialgenomeofamedicinalfungustolypocladiumophioglossoides
AT xinaichen thecompletemitochondrialgenomeofamedicinalfungustolypocladiumophioglossoides
AT fanglianghuang completemitochondrialgenomeofamedicinalfungustolypocladiumophioglossoides
AT yongquanli completemitochondrialgenomeofamedicinalfungustolypocladiumophioglossoides
AT xinaichen completemitochondrialgenomeofamedicinalfungustolypocladiumophioglossoides