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Pimelodus maculatus (Siluriformes, Pimelodidae): complete mtDNA sequence of an economically important fish from the São Francisco river basin

Pimelodus maculatus is an important commercial fish found in the São Francisco and Paraná river basins. NGS was used to sequence the mtDNA of P. maculatus. The mtDNA was annotated and aligned with that of 25 other fish species to enable phylogenetic analysis. The complete mtDNA molecule had 16,561 b...

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Autores principales: Resende, Leonardo Cardoso, do Carmo, Anderson Oliveira, Núñez-Rodriguez, Daniela, Pimentel, Juliana da Silva Martins, Bedore, Alessandra Gomes, Leal, Hortênsia Gomes, Kalapothakis, Evanguedes
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799811/
https://www.ncbi.nlm.nih.gov/pubmed/33473635
http://dx.doi.org/10.1080/23802359.2016.1219646
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author Resende, Leonardo Cardoso
do Carmo, Anderson Oliveira
Núñez-Rodriguez, Daniela
Pimentel, Juliana da Silva Martins
Bedore, Alessandra Gomes
Leal, Hortênsia Gomes
Kalapothakis, Evanguedes
author_facet Resende, Leonardo Cardoso
do Carmo, Anderson Oliveira
Núñez-Rodriguez, Daniela
Pimentel, Juliana da Silva Martins
Bedore, Alessandra Gomes
Leal, Hortênsia Gomes
Kalapothakis, Evanguedes
author_sort Resende, Leonardo Cardoso
collection PubMed
description Pimelodus maculatus is an important commercial fish found in the São Francisco and Paraná river basins. NGS was used to sequence the mtDNA of P. maculatus. The mtDNA was annotated and aligned with that of 25 other fish species to enable phylogenetic analysis. The complete mtDNA molecule had 16,561 bp and its GC content was 43.7%; the structure was similar to that of other vertebrates: 2 rRNA, 22 tRNA, 13 protein-coding genes, and a D-loop region containing 914 bp. Phylogenetic analysis yielded a tree with a high bootstrap coefficient that was coherent with the actual phylogeny of the species.
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spelling pubmed-77998112021-01-19 Pimelodus maculatus (Siluriformes, Pimelodidae): complete mtDNA sequence of an economically important fish from the São Francisco river basin Resende, Leonardo Cardoso do Carmo, Anderson Oliveira Núñez-Rodriguez, Daniela Pimentel, Juliana da Silva Martins Bedore, Alessandra Gomes Leal, Hortênsia Gomes Kalapothakis, Evanguedes Mitochondrial DNA B Resour Mitogenome Announcement Pimelodus maculatus is an important commercial fish found in the São Francisco and Paraná river basins. NGS was used to sequence the mtDNA of P. maculatus. The mtDNA was annotated and aligned with that of 25 other fish species to enable phylogenetic analysis. The complete mtDNA molecule had 16,561 bp and its GC content was 43.7%; the structure was similar to that of other vertebrates: 2 rRNA, 22 tRNA, 13 protein-coding genes, and a D-loop region containing 914 bp. Phylogenetic analysis yielded a tree with a high bootstrap coefficient that was coherent with the actual phylogeny of the species. Taylor & Francis 2016-11-22 /pmc/articles/PMC7799811/ /pubmed/33473635 http://dx.doi.org/10.1080/23802359.2016.1219646 Text en © 2016 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Resende, Leonardo Cardoso
do Carmo, Anderson Oliveira
Núñez-Rodriguez, Daniela
Pimentel, Juliana da Silva Martins
Bedore, Alessandra Gomes
Leal, Hortênsia Gomes
Kalapothakis, Evanguedes
Pimelodus maculatus (Siluriformes, Pimelodidae): complete mtDNA sequence of an economically important fish from the São Francisco river basin
title Pimelodus maculatus (Siluriformes, Pimelodidae): complete mtDNA sequence of an economically important fish from the São Francisco river basin
title_full Pimelodus maculatus (Siluriformes, Pimelodidae): complete mtDNA sequence of an economically important fish from the São Francisco river basin
title_fullStr Pimelodus maculatus (Siluriformes, Pimelodidae): complete mtDNA sequence of an economically important fish from the São Francisco river basin
title_full_unstemmed Pimelodus maculatus (Siluriformes, Pimelodidae): complete mtDNA sequence of an economically important fish from the São Francisco river basin
title_short Pimelodus maculatus (Siluriformes, Pimelodidae): complete mtDNA sequence of an economically important fish from the São Francisco river basin
title_sort pimelodus maculatus (siluriformes, pimelodidae): complete mtdna sequence of an economically important fish from the são francisco river basin
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799811/
https://www.ncbi.nlm.nih.gov/pubmed/33473635
http://dx.doi.org/10.1080/23802359.2016.1219646
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