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Pimelodus maculatus (Siluriformes, Pimelodidae): complete mtDNA sequence of an economically important fish from the São Francisco river basin
Pimelodus maculatus is an important commercial fish found in the São Francisco and Paraná river basins. NGS was used to sequence the mtDNA of P. maculatus. The mtDNA was annotated and aligned with that of 25 other fish species to enable phylogenetic analysis. The complete mtDNA molecule had 16,561 b...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799811/ https://www.ncbi.nlm.nih.gov/pubmed/33473635 http://dx.doi.org/10.1080/23802359.2016.1219646 |
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author | Resende, Leonardo Cardoso do Carmo, Anderson Oliveira Núñez-Rodriguez, Daniela Pimentel, Juliana da Silva Martins Bedore, Alessandra Gomes Leal, Hortênsia Gomes Kalapothakis, Evanguedes |
author_facet | Resende, Leonardo Cardoso do Carmo, Anderson Oliveira Núñez-Rodriguez, Daniela Pimentel, Juliana da Silva Martins Bedore, Alessandra Gomes Leal, Hortênsia Gomes Kalapothakis, Evanguedes |
author_sort | Resende, Leonardo Cardoso |
collection | PubMed |
description | Pimelodus maculatus is an important commercial fish found in the São Francisco and Paraná river basins. NGS was used to sequence the mtDNA of P. maculatus. The mtDNA was annotated and aligned with that of 25 other fish species to enable phylogenetic analysis. The complete mtDNA molecule had 16,561 bp and its GC content was 43.7%; the structure was similar to that of other vertebrates: 2 rRNA, 22 tRNA, 13 protein-coding genes, and a D-loop region containing 914 bp. Phylogenetic analysis yielded a tree with a high bootstrap coefficient that was coherent with the actual phylogeny of the species. |
format | Online Article Text |
id | pubmed-7799811 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77998112021-01-19 Pimelodus maculatus (Siluriformes, Pimelodidae): complete mtDNA sequence of an economically important fish from the São Francisco river basin Resende, Leonardo Cardoso do Carmo, Anderson Oliveira Núñez-Rodriguez, Daniela Pimentel, Juliana da Silva Martins Bedore, Alessandra Gomes Leal, Hortênsia Gomes Kalapothakis, Evanguedes Mitochondrial DNA B Resour Mitogenome Announcement Pimelodus maculatus is an important commercial fish found in the São Francisco and Paraná river basins. NGS was used to sequence the mtDNA of P. maculatus. The mtDNA was annotated and aligned with that of 25 other fish species to enable phylogenetic analysis. The complete mtDNA molecule had 16,561 bp and its GC content was 43.7%; the structure was similar to that of other vertebrates: 2 rRNA, 22 tRNA, 13 protein-coding genes, and a D-loop region containing 914 bp. Phylogenetic analysis yielded a tree with a high bootstrap coefficient that was coherent with the actual phylogeny of the species. Taylor & Francis 2016-11-22 /pmc/articles/PMC7799811/ /pubmed/33473635 http://dx.doi.org/10.1080/23802359.2016.1219646 Text en © 2016 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Resende, Leonardo Cardoso do Carmo, Anderson Oliveira Núñez-Rodriguez, Daniela Pimentel, Juliana da Silva Martins Bedore, Alessandra Gomes Leal, Hortênsia Gomes Kalapothakis, Evanguedes Pimelodus maculatus (Siluriformes, Pimelodidae): complete mtDNA sequence of an economically important fish from the São Francisco river basin |
title | Pimelodus maculatus (Siluriformes, Pimelodidae): complete mtDNA sequence of an economically important fish from the São Francisco river basin |
title_full | Pimelodus maculatus (Siluriformes, Pimelodidae): complete mtDNA sequence of an economically important fish from the São Francisco river basin |
title_fullStr | Pimelodus maculatus (Siluriformes, Pimelodidae): complete mtDNA sequence of an economically important fish from the São Francisco river basin |
title_full_unstemmed | Pimelodus maculatus (Siluriformes, Pimelodidae): complete mtDNA sequence of an economically important fish from the São Francisco river basin |
title_short | Pimelodus maculatus (Siluriformes, Pimelodidae): complete mtDNA sequence of an economically important fish from the São Francisco river basin |
title_sort | pimelodus maculatus (siluriformes, pimelodidae): complete mtdna sequence of an economically important fish from the são francisco river basin |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799811/ https://www.ncbi.nlm.nih.gov/pubmed/33473635 http://dx.doi.org/10.1080/23802359.2016.1219646 |
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