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The complete chloroplast genome of the medicinal plant Angelica decursiva (Apiaceae) in Peucedani Radix
Angelica decursiva (Miquel) Franchet & Savatier (Apiaceae) has been used as a significant medicinal plant in East Asia. We determined its complete chloroplast genome for the first time in this study. The complete chloroplast was circularized and had a typical quadripartite structure genome of 14...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799925/ https://www.ncbi.nlm.nih.gov/pubmed/33473454 http://dx.doi.org/10.1080/23802359.2016.1155089 |
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author | Choi, Sun A. Kim, Ye Ji Lee, Woo Kyu Kim, Kyu Yeob Kim, Jong Hwan Seong, Rack Seon |
author_facet | Choi, Sun A. Kim, Ye Ji Lee, Woo Kyu Kim, Kyu Yeob Kim, Jong Hwan Seong, Rack Seon |
author_sort | Choi, Sun A. |
collection | PubMed |
description | Angelica decursiva (Miquel) Franchet & Savatier (Apiaceae) has been used as a significant medicinal plant in East Asia. We determined its complete chloroplast genome for the first time in this study. The complete chloroplast was circularized and had a typical quadripartite structure genome of 146 719 bp long including the large single copy region (LSC) of 93 256 bp, the small single copy region (SSC) of 17 497 bp and duplicated inverted regions (IRs) of 17 983 bp each. The total GC content was 37.56% and for the four structures it was 35.98% (LSC), 31.06% (SSC), and 44.83% (for each IR). There were a total of 113 genes, comprising four rRNAs, 29 tRNAs and 80 protein coding genes. In the phylogenetic analysis, A. decursiva was grouped with Seseli montanum. This study may contribute to authenticating the plant’s correct use as medicine for health and provide an important genetic resource for phylogeny with related species. |
format | Online Article Text |
id | pubmed-7799925 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77999252021-01-19 The complete chloroplast genome of the medicinal plant Angelica decursiva (Apiaceae) in Peucedani Radix Choi, Sun A. Kim, Ye Ji Lee, Woo Kyu Kim, Kyu Yeob Kim, Jong Hwan Seong, Rack Seon Mitochondrial DNA B Resour Mitogenome Announcement Angelica decursiva (Miquel) Franchet & Savatier (Apiaceae) has been used as a significant medicinal plant in East Asia. We determined its complete chloroplast genome for the first time in this study. The complete chloroplast was circularized and had a typical quadripartite structure genome of 146 719 bp long including the large single copy region (LSC) of 93 256 bp, the small single copy region (SSC) of 17 497 bp and duplicated inverted regions (IRs) of 17 983 bp each. The total GC content was 37.56% and for the four structures it was 35.98% (LSC), 31.06% (SSC), and 44.83% (for each IR). There were a total of 113 genes, comprising four rRNAs, 29 tRNAs and 80 protein coding genes. In the phylogenetic analysis, A. decursiva was grouped with Seseli montanum. This study may contribute to authenticating the plant’s correct use as medicine for health and provide an important genetic resource for phylogeny with related species. Taylor & Francis 2016-03-28 /pmc/articles/PMC7799925/ /pubmed/33473454 http://dx.doi.org/10.1080/23802359.2016.1155089 Text en © 2016 The Author(s). Published by Taylor & Francis. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Choi, Sun A. Kim, Ye Ji Lee, Woo Kyu Kim, Kyu Yeob Kim, Jong Hwan Seong, Rack Seon The complete chloroplast genome of the medicinal plant Angelica decursiva (Apiaceae) in Peucedani Radix |
title | The complete chloroplast genome of the medicinal plant Angelica decursiva (Apiaceae) in Peucedani Radix |
title_full | The complete chloroplast genome of the medicinal plant Angelica decursiva (Apiaceae) in Peucedani Radix |
title_fullStr | The complete chloroplast genome of the medicinal plant Angelica decursiva (Apiaceae) in Peucedani Radix |
title_full_unstemmed | The complete chloroplast genome of the medicinal plant Angelica decursiva (Apiaceae) in Peucedani Radix |
title_short | The complete chloroplast genome of the medicinal plant Angelica decursiva (Apiaceae) in Peucedani Radix |
title_sort | complete chloroplast genome of the medicinal plant angelica decursiva (apiaceae) in peucedani radix |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799925/ https://www.ncbi.nlm.nih.gov/pubmed/33473454 http://dx.doi.org/10.1080/23802359.2016.1155089 |
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