Complete mitochondrial genome of Sri Lankan Junglefowl (Gallus lafayetti) and phylogenetic study

The complete mitochondrial genomes of two Sri Lankan junglefowl (Gallus lafayetti: CJF) individuals were sequenced by using next-generation sequencing technique. Samples were collected from Rathnapura and Pelmadulla areas in Sri Lanka. The complete mitochondrial DNA is 16,839 bp in length, with a ty...

Descripción completa

Detalles Bibliográficos
Autores principales: Hirimuthugoda, Nalini Yasoda, Adeola, Adeniyi C., Chen, Xing, Perera, Patthamesthrige Wimal Anthony, Gunawardena, Weligalle Wedarallage Dewar Asoka, Gunwardana, Humpita Gamaralalage Thilini Nisanka, Yin, Ting-Ting, Wang, Ming-Shan, Li, Gui-Mei, Peng, Min-Sheng, Zhang, Ya-Ping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799929/
https://www.ncbi.nlm.nih.gov/pubmed/33474074
http://dx.doi.org/10.1080/23802359.2017.1422409
Descripción
Sumario:The complete mitochondrial genomes of two Sri Lankan junglefowl (Gallus lafayetti: CJF) individuals were sequenced by using next-generation sequencing technique. Samples were collected from Rathnapura and Pelmadulla areas in Sri Lanka. The complete mitochondrial DNA is 16,839 bp in length, with a typical mitogenome structure composed of a non-coding control region, 22 tRNA, two rRNA, and 13 protein-coding genes. Overall base composition is 30% A, 23.9% T, 32.3% C, and 13.6% G indicating high content of 54.0% A + T for both individuals. Phylogenetic analysis reveals that CJF samples cluster with the clade of the green junglefowl (Gallus varius) and red junglefowl (Gallus gallus) than to grey junglefowl (Gallus sonerattii: GyJF). This result can be subsequently used to provide essential information for junglefowl evolution.

Ejemplares similares