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Complete mitochondrial genome of Haematopus ostralegus (Charadriiformes: Haematopodidae)
The Eurasian oystercatcher (Haematopus ostralegus), Near Threatened in the IUCN red list, was designated classified endangered species II by the Ministry of Environment of Korea and a Natural Monument (No. 326) by the Cultural Heritage Administration of Korea. In this study, the complete mitochondri...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2017
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799934/ https://www.ncbi.nlm.nih.gov/pubmed/33473739 http://dx.doi.org/10.1080/23802359.2017.1292474 |
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author | Lee, Mu-Yeong Jeon, Hey Sook Choi, Yu-Seong Joo, Sungbae An, Junghwa |
author_facet | Lee, Mu-Yeong Jeon, Hey Sook Choi, Yu-Seong Joo, Sungbae An, Junghwa |
author_sort | Lee, Mu-Yeong |
collection | PubMed |
description | The Eurasian oystercatcher (Haematopus ostralegus), Near Threatened in the IUCN red list, was designated classified endangered species II by the Ministry of Environment of Korea and a Natural Monument (No. 326) by the Cultural Heritage Administration of Korea. In this study, the complete mitochondrial genome (16,798 bp) of H. ostralegus was determined for the first time, including 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes, and 1 non-coding region. The overall base composition was A (31.4%), C (31.3%), G (13.8%), and T (23.5%), so the percentage of A and T (54.9%) was slightly higher than that of G and C. A phylogenetic analysis using concatenated mitogenomes revealed that the family Haematopodidae has a closer relationship with the family Recurvirostridae and H. ostralegus and H. ater clustered together. The results are expected to provide useful resources for species identification and further phylogenetic studies of genus Haematopus. |
format | Online Article Text |
id | pubmed-7799934 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77999342021-01-19 Complete mitochondrial genome of Haematopus ostralegus (Charadriiformes: Haematopodidae) Lee, Mu-Yeong Jeon, Hey Sook Choi, Yu-Seong Joo, Sungbae An, Junghwa Mitochondrial DNA B Resour Mitogenome Announcement The Eurasian oystercatcher (Haematopus ostralegus), Near Threatened in the IUCN red list, was designated classified endangered species II by the Ministry of Environment of Korea and a Natural Monument (No. 326) by the Cultural Heritage Administration of Korea. In this study, the complete mitochondrial genome (16,798 bp) of H. ostralegus was determined for the first time, including 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes, and 1 non-coding region. The overall base composition was A (31.4%), C (31.3%), G (13.8%), and T (23.5%), so the percentage of A and T (54.9%) was slightly higher than that of G and C. A phylogenetic analysis using concatenated mitogenomes revealed that the family Haematopodidae has a closer relationship with the family Recurvirostridae and H. ostralegus and H. ater clustered together. The results are expected to provide useful resources for species identification and further phylogenetic studies of genus Haematopus. Taylor & Francis 2017-02-23 /pmc/articles/PMC7799934/ /pubmed/33473739 http://dx.doi.org/10.1080/23802359.2017.1292474 Text en © 2017 National Institute of Biological Resources. Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Lee, Mu-Yeong Jeon, Hey Sook Choi, Yu-Seong Joo, Sungbae An, Junghwa Complete mitochondrial genome of Haematopus ostralegus (Charadriiformes: Haematopodidae) |
title | Complete mitochondrial genome of Haematopus ostralegus (Charadriiformes: Haematopodidae) |
title_full | Complete mitochondrial genome of Haematopus ostralegus (Charadriiformes: Haematopodidae) |
title_fullStr | Complete mitochondrial genome of Haematopus ostralegus (Charadriiformes: Haematopodidae) |
title_full_unstemmed | Complete mitochondrial genome of Haematopus ostralegus (Charadriiformes: Haematopodidae) |
title_short | Complete mitochondrial genome of Haematopus ostralegus (Charadriiformes: Haematopodidae) |
title_sort | complete mitochondrial genome of haematopus ostralegus (charadriiformes: haematopodidae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799934/ https://www.ncbi.nlm.nih.gov/pubmed/33473739 http://dx.doi.org/10.1080/23802359.2017.1292474 |
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