Cargando…

Complete mitochondrial genome of Haematopus ostralegus (Charadriiformes: Haematopodidae)

The Eurasian oystercatcher (Haematopus ostralegus), Near Threatened in the IUCN red list, was designated classified endangered species II by the Ministry of Environment of Korea and a Natural Monument (No. 326) by the Cultural Heritage Administration of Korea. In this study, the complete mitochondri...

Descripción completa

Detalles Bibliográficos
Autores principales: Lee, Mu-Yeong, Jeon, Hey Sook, Choi, Yu-Seong, Joo, Sungbae, An, Junghwa
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799934/
https://www.ncbi.nlm.nih.gov/pubmed/33473739
http://dx.doi.org/10.1080/23802359.2017.1292474
_version_ 1783635236706320384
author Lee, Mu-Yeong
Jeon, Hey Sook
Choi, Yu-Seong
Joo, Sungbae
An, Junghwa
author_facet Lee, Mu-Yeong
Jeon, Hey Sook
Choi, Yu-Seong
Joo, Sungbae
An, Junghwa
author_sort Lee, Mu-Yeong
collection PubMed
description The Eurasian oystercatcher (Haematopus ostralegus), Near Threatened in the IUCN red list, was designated classified endangered species II by the Ministry of Environment of Korea and a Natural Monument (No. 326) by the Cultural Heritage Administration of Korea. In this study, the complete mitochondrial genome (16,798 bp) of H. ostralegus was determined for the first time, including 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes, and 1 non-coding region. The overall base composition was A (31.4%), C (31.3%), G (13.8%), and T (23.5%), so the percentage of A and T (54.9%) was slightly higher than that of G and C. A phylogenetic analysis using concatenated mitogenomes revealed that the family Haematopodidae has a closer relationship with the family Recurvirostridae and H. ostralegus and H. ater clustered together. The results are expected to provide useful resources for species identification and further phylogenetic studies of genus Haematopus.
format Online
Article
Text
id pubmed-7799934
institution National Center for Biotechnology Information
language English
publishDate 2017
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77999342021-01-19 Complete mitochondrial genome of Haematopus ostralegus (Charadriiformes: Haematopodidae) Lee, Mu-Yeong Jeon, Hey Sook Choi, Yu-Seong Joo, Sungbae An, Junghwa Mitochondrial DNA B Resour Mitogenome Announcement The Eurasian oystercatcher (Haematopus ostralegus), Near Threatened in the IUCN red list, was designated classified endangered species II by the Ministry of Environment of Korea and a Natural Monument (No. 326) by the Cultural Heritage Administration of Korea. In this study, the complete mitochondrial genome (16,798 bp) of H. ostralegus was determined for the first time, including 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes, and 1 non-coding region. The overall base composition was A (31.4%), C (31.3%), G (13.8%), and T (23.5%), so the percentage of A and T (54.9%) was slightly higher than that of G and C. A phylogenetic analysis using concatenated mitogenomes revealed that the family Haematopodidae has a closer relationship with the family Recurvirostridae and H. ostralegus and H. ater clustered together. The results are expected to provide useful resources for species identification and further phylogenetic studies of genus Haematopus. Taylor & Francis 2017-02-23 /pmc/articles/PMC7799934/ /pubmed/33473739 http://dx.doi.org/10.1080/23802359.2017.1292474 Text en © 2017 National Institute of Biological Resources. Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Lee, Mu-Yeong
Jeon, Hey Sook
Choi, Yu-Seong
Joo, Sungbae
An, Junghwa
Complete mitochondrial genome of Haematopus ostralegus (Charadriiformes: Haematopodidae)
title Complete mitochondrial genome of Haematopus ostralegus (Charadriiformes: Haematopodidae)
title_full Complete mitochondrial genome of Haematopus ostralegus (Charadriiformes: Haematopodidae)
title_fullStr Complete mitochondrial genome of Haematopus ostralegus (Charadriiformes: Haematopodidae)
title_full_unstemmed Complete mitochondrial genome of Haematopus ostralegus (Charadriiformes: Haematopodidae)
title_short Complete mitochondrial genome of Haematopus ostralegus (Charadriiformes: Haematopodidae)
title_sort complete mitochondrial genome of haematopus ostralegus (charadriiformes: haematopodidae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799934/
https://www.ncbi.nlm.nih.gov/pubmed/33473739
http://dx.doi.org/10.1080/23802359.2017.1292474
work_keys_str_mv AT leemuyeong completemitochondrialgenomeofhaematopusostraleguscharadriiformeshaematopodidae
AT jeonheysook completemitochondrialgenomeofhaematopusostraleguscharadriiformeshaematopodidae
AT choiyuseong completemitochondrialgenomeofhaematopusostraleguscharadriiformeshaematopodidae
AT joosungbae completemitochondrialgenomeofhaematopusostraleguscharadriiformeshaematopodidae
AT anjunghwa completemitochondrialgenomeofhaematopusostraleguscharadriiformeshaematopodidae