The complete mitochondrial genome of Epinephelus Chlorostigma (Serranidae; Epinephelus) with phylogenetic consideration of Epinephelus

The complete mitochondrial genome of Epinephelus chlorostigma has been determined. It contains a typically conserved structure including 13 protein-coding genes, 22 tRNA genes, two rRNA genes and one control region, and the whole sequence was 16,894 bp in length. The overall base composition is A 28...

Descripción completa

Detalles Bibliográficos
Autores principales: Du, Xun, Gong, Li, Chen, Wei, Liu, Liqin, Lü, Zhenming
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799945/
https://www.ncbi.nlm.nih.gov/pubmed/33474120
http://dx.doi.org/10.1080/23802359.2018.1436992
_version_ 1783635239256457216
author Du, Xun
Gong, Li
Chen, Wei
Liu, Liqin
Lü, Zhenming
author_facet Du, Xun
Gong, Li
Chen, Wei
Liu, Liqin
Lü, Zhenming
author_sort Du, Xun
collection PubMed
description The complete mitochondrial genome of Epinephelus chlorostigma has been determined. It contains a typically conserved structure including 13 protein-coding genes, 22 tRNA genes, two rRNA genes and one control region, and the whole sequence was 16,894 bp in length. The overall base composition is A 28.70%, C 27.99%, G 16.28%, T 27.03%. Except ND6 and eight tRNA genes, all other mitochondrial genes are encoded on the heavy strand. Phylogenetic tree was constructed based on 12 protein-coding genes sequences of 18 Epinephelus species, four species belong to Cephalopholis as outgroup, the result showed that E. chlorostigma is most closely related to Epinephelus areolatus. We sequenced the complete mitochondrial genome of E. chlorostigma to enrich the resource of molecular markers for examination of phylogenetic relationships in Epinephelus.
format Online
Article
Text
id pubmed-7799945
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77999452021-01-19 The complete mitochondrial genome of Epinephelus Chlorostigma (Serranidae; Epinephelus) with phylogenetic consideration of Epinephelus Du, Xun Gong, Li Chen, Wei Liu, Liqin Lü, Zhenming Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial genome of Epinephelus chlorostigma has been determined. It contains a typically conserved structure including 13 protein-coding genes, 22 tRNA genes, two rRNA genes and one control region, and the whole sequence was 16,894 bp in length. The overall base composition is A 28.70%, C 27.99%, G 16.28%, T 27.03%. Except ND6 and eight tRNA genes, all other mitochondrial genes are encoded on the heavy strand. Phylogenetic tree was constructed based on 12 protein-coding genes sequences of 18 Epinephelus species, four species belong to Cephalopholis as outgroup, the result showed that E. chlorostigma is most closely related to Epinephelus areolatus. We sequenced the complete mitochondrial genome of E. chlorostigma to enrich the resource of molecular markers for examination of phylogenetic relationships in Epinephelus. Taylor & Francis 2018-02-10 /pmc/articles/PMC7799945/ /pubmed/33474120 http://dx.doi.org/10.1080/23802359.2018.1436992 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Du, Xun
Gong, Li
Chen, Wei
Liu, Liqin
Lü, Zhenming
The complete mitochondrial genome of Epinephelus Chlorostigma (Serranidae; Epinephelus) with phylogenetic consideration of Epinephelus
title The complete mitochondrial genome of Epinephelus Chlorostigma (Serranidae; Epinephelus) with phylogenetic consideration of Epinephelus
title_full The complete mitochondrial genome of Epinephelus Chlorostigma (Serranidae; Epinephelus) with phylogenetic consideration of Epinephelus
title_fullStr The complete mitochondrial genome of Epinephelus Chlorostigma (Serranidae; Epinephelus) with phylogenetic consideration of Epinephelus
title_full_unstemmed The complete mitochondrial genome of Epinephelus Chlorostigma (Serranidae; Epinephelus) with phylogenetic consideration of Epinephelus
title_short The complete mitochondrial genome of Epinephelus Chlorostigma (Serranidae; Epinephelus) with phylogenetic consideration of Epinephelus
title_sort complete mitochondrial genome of epinephelus chlorostigma (serranidae; epinephelus) with phylogenetic consideration of epinephelus
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799945/
https://www.ncbi.nlm.nih.gov/pubmed/33474120
http://dx.doi.org/10.1080/23802359.2018.1436992
work_keys_str_mv AT duxun thecompletemitochondrialgenomeofepinepheluschlorostigmaserranidaeepinepheluswithphylogeneticconsiderationofepinephelus
AT gongli thecompletemitochondrialgenomeofepinepheluschlorostigmaserranidaeepinepheluswithphylogeneticconsiderationofepinephelus
AT chenwei thecompletemitochondrialgenomeofepinepheluschlorostigmaserranidaeepinepheluswithphylogeneticconsiderationofepinephelus
AT liuliqin thecompletemitochondrialgenomeofepinepheluschlorostigmaserranidaeepinepheluswithphylogeneticconsiderationofepinephelus
AT luzhenming thecompletemitochondrialgenomeofepinepheluschlorostigmaserranidaeepinepheluswithphylogeneticconsiderationofepinephelus
AT duxun completemitochondrialgenomeofepinepheluschlorostigmaserranidaeepinepheluswithphylogeneticconsiderationofepinephelus
AT gongli completemitochondrialgenomeofepinepheluschlorostigmaserranidaeepinepheluswithphylogeneticconsiderationofepinephelus
AT chenwei completemitochondrialgenomeofepinepheluschlorostigmaserranidaeepinepheluswithphylogeneticconsiderationofepinephelus
AT liuliqin completemitochondrialgenomeofepinepheluschlorostigmaserranidaeepinepheluswithphylogeneticconsiderationofepinephelus
AT luzhenming completemitochondrialgenomeofepinepheluschlorostigmaserranidaeepinepheluswithphylogeneticconsiderationofepinephelus

Ejemplares similares