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Characterization of the complete chloroplast genome sequence of Camellia oleifera in Hainan, China
Camellia oleifera, an evergreen small tree or shrub with high medicinal and ecological values, is mainly distributed in subtropical montane regions of China. In this study, complete chloroplast genome was reported for Camellia oleifera in Hainan, China. The results showed that the whole genome was 1...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799952/ https://www.ncbi.nlm.nih.gov/pubmed/33474005 http://dx.doi.org/10.1080/23802359.2017.1407687 |
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author | Zhang, Wan Zhao, Yunlin Yang, Guiyan Tang, Yongcheng Xu, Zhenggang |
author_facet | Zhang, Wan Zhao, Yunlin Yang, Guiyan Tang, Yongcheng Xu, Zhenggang |
author_sort | Zhang, Wan |
collection | PubMed |
description | Camellia oleifera, an evergreen small tree or shrub with high medicinal and ecological values, is mainly distributed in subtropical montane regions of China. In this study, complete chloroplast genome was reported for Camellia oleifera in Hainan, China. The results showed that the whole genome was 156,996 bp in length, including a pair of inverted repeats (IRs) of 26,025 bp, a large single copy (LSC) region of 86,649 bp and a small single copy (SSC) region of 18,297 bp. The genome contained a total of 115 different genes, including 81 protein-coding genes, 30 tRNA genes, and four rRNA genes. Among these genes, eight genes contain a single intron and two genes contain two introns. The total GC content of Camellia oleifera was 37.29%. The maximum likelihood phylogenetic analysis based on 21 chloroplast genomes showed that Camellia oleifera was similar to Camellia danzaiensis. |
format | Online Article Text |
id | pubmed-7799952 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77999522021-01-19 Characterization of the complete chloroplast genome sequence of Camellia oleifera in Hainan, China Zhang, Wan Zhao, Yunlin Yang, Guiyan Tang, Yongcheng Xu, Zhenggang Mitochondrial DNA B Resour Mitogenome Announcement Camellia oleifera, an evergreen small tree or shrub with high medicinal and ecological values, is mainly distributed in subtropical montane regions of China. In this study, complete chloroplast genome was reported for Camellia oleifera in Hainan, China. The results showed that the whole genome was 156,996 bp in length, including a pair of inverted repeats (IRs) of 26,025 bp, a large single copy (LSC) region of 86,649 bp and a small single copy (SSC) region of 18,297 bp. The genome contained a total of 115 different genes, including 81 protein-coding genes, 30 tRNA genes, and four rRNA genes. Among these genes, eight genes contain a single intron and two genes contain two introns. The total GC content of Camellia oleifera was 37.29%. The maximum likelihood phylogenetic analysis based on 21 chloroplast genomes showed that Camellia oleifera was similar to Camellia danzaiensis. Taylor & Francis 2017-11-26 /pmc/articles/PMC7799952/ /pubmed/33474005 http://dx.doi.org/10.1080/23802359.2017.1407687 Text en © 2017 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Mitogenome Announcement Zhang, Wan Zhao, Yunlin Yang, Guiyan Tang, Yongcheng Xu, Zhenggang Characterization of the complete chloroplast genome sequence of Camellia oleifera in Hainan, China |
title | Characterization of the complete chloroplast genome sequence of Camellia oleifera in Hainan, China |
title_full | Characterization of the complete chloroplast genome sequence of Camellia oleifera in Hainan, China |
title_fullStr | Characterization of the complete chloroplast genome sequence of Camellia oleifera in Hainan, China |
title_full_unstemmed | Characterization of the complete chloroplast genome sequence of Camellia oleifera in Hainan, China |
title_short | Characterization of the complete chloroplast genome sequence of Camellia oleifera in Hainan, China |
title_sort | characterization of the complete chloroplast genome sequence of camellia oleifera in hainan, china |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799952/ https://www.ncbi.nlm.nih.gov/pubmed/33474005 http://dx.doi.org/10.1080/23802359.2017.1407687 |
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