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The complete chloroplast genome of Pimpinella rhomboidea var. tenuiloba

Pimpinella rhomboidea var. tenuiloba is an endemic species in China. The complete chloroplast genome sequence of P. rhomboidea var. tenuiloba was generated by de novo assembly using whole genome next generation sequencing. The genome was 146,655 bp in length, composed of four distinct regions such a...

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Detalles Bibliográficos
Autores principales: Tan, Jinbo, Yu, Yan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799953/
https://www.ncbi.nlm.nih.gov/pubmed/33474082
http://dx.doi.org/10.1080/23802359.2018.1424580
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author Tan, Jinbo
Yu, Yan
author_facet Tan, Jinbo
Yu, Yan
author_sort Tan, Jinbo
collection PubMed
description Pimpinella rhomboidea var. tenuiloba is an endemic species in China. The complete chloroplast genome sequence of P. rhomboidea var. tenuiloba was generated by de novo assembly using whole genome next generation sequencing. The genome was 146,655 bp in length, composed of four distinct regions such as large single copy (LSC) region of 94,684 bp, small single copy (SSC) region 17,537 bp and a pair of inverted repeat regions of 17,217 bp. The genome annotation predicted a total of 113 genes, including 80 protein-coding genes, 29 tRNA genes, and 4 rRNA genes. Phylogenetic analysis with the reported chloroplast genomes revealed that P. rhomboidea var. tenuiloba has close relationship with genus Angelica.
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spelling pubmed-77999532021-01-19 The complete chloroplast genome of Pimpinella rhomboidea var. tenuiloba Tan, Jinbo Yu, Yan Mitochondrial DNA B Resour Mitogenome Announcement Pimpinella rhomboidea var. tenuiloba is an endemic species in China. The complete chloroplast genome sequence of P. rhomboidea var. tenuiloba was generated by de novo assembly using whole genome next generation sequencing. The genome was 146,655 bp in length, composed of four distinct regions such as large single copy (LSC) region of 94,684 bp, small single copy (SSC) region 17,537 bp and a pair of inverted repeat regions of 17,217 bp. The genome annotation predicted a total of 113 genes, including 80 protein-coding genes, 29 tRNA genes, and 4 rRNA genes. Phylogenetic analysis with the reported chloroplast genomes revealed that P. rhomboidea var. tenuiloba has close relationship with genus Angelica. Taylor & Francis 2018-01-09 /pmc/articles/PMC7799953/ /pubmed/33474082 http://dx.doi.org/10.1080/23802359.2018.1424580 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Tan, Jinbo
Yu, Yan
The complete chloroplast genome of Pimpinella rhomboidea var. tenuiloba
title The complete chloroplast genome of Pimpinella rhomboidea var. tenuiloba
title_full The complete chloroplast genome of Pimpinella rhomboidea var. tenuiloba
title_fullStr The complete chloroplast genome of Pimpinella rhomboidea var. tenuiloba
title_full_unstemmed The complete chloroplast genome of Pimpinella rhomboidea var. tenuiloba
title_short The complete chloroplast genome of Pimpinella rhomboidea var. tenuiloba
title_sort complete chloroplast genome of pimpinella rhomboidea var. tenuiloba
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799953/
https://www.ncbi.nlm.nih.gov/pubmed/33474082
http://dx.doi.org/10.1080/23802359.2018.1424580
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