Complete chloroplast genome of an endangered tree species, Toona ciliata (Sapindales: Meliaceae)

The whole cp genome of T. ciliata was 159,502 bp in length, containing a pair of inverted repeat (26,961 bp for each), a large single copy (87,199 bp) and a small single copy (18,381 bp) regions. The cp genome encoded 138 genes, including 89 protein-coding genes, 40 tRNA genes, 8 rRNA genes and 1 ps...

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Detalles Bibliográficos
Autores principales: Xin, Gui-Liang, Liu, Jia-qian, Liu, Jia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799959/
https://www.ncbi.nlm.nih.gov/pubmed/33474276
http://dx.doi.org/10.1080/23802359.2018.1476074
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author Xin, Gui-Liang
Liu, Jia-qian
Liu, Jia
author_facet Xin, Gui-Liang
Liu, Jia-qian
Liu, Jia
author_sort Xin, Gui-Liang
collection PubMed
description The whole cp genome of T. ciliata was 159,502 bp in length, containing a pair of inverted repeat (26,961 bp for each), a large single copy (87,199 bp) and a small single copy (18,381 bp) regions. The cp genome encoded 138 genes, including 89 protein-coding genes, 40 tRNA genes, 8 rRNA genes and 1 pseudogene. The nucleotide composition was asymmetric (30.7% A, 19.3% C, 18.6% G and 31.4% T) with an overall GC content of 37.9%. The maximum likelihood phylogenetic analysis based on 21 complete cp genome sequences showed that T. ciliata closely related to Azadirachta indica.
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spelling pubmed-77999592021-01-19 Complete chloroplast genome of an endangered tree species, Toona ciliata (Sapindales: Meliaceae) Xin, Gui-Liang Liu, Jia-qian Liu, Jia Mitochondrial DNA B Resour Mitogenome Announcement The whole cp genome of T. ciliata was 159,502 bp in length, containing a pair of inverted repeat (26,961 bp for each), a large single copy (87,199 bp) and a small single copy (18,381 bp) regions. The cp genome encoded 138 genes, including 89 protein-coding genes, 40 tRNA genes, 8 rRNA genes and 1 pseudogene. The nucleotide composition was asymmetric (30.7% A, 19.3% C, 18.6% G and 31.4% T) with an overall GC content of 37.9%. The maximum likelihood phylogenetic analysis based on 21 complete cp genome sequences showed that T. ciliata closely related to Azadirachta indica. Taylor & Francis 2018-06-08 /pmc/articles/PMC7799959/ /pubmed/33474276 http://dx.doi.org/10.1080/23802359.2018.1476074 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Mitogenome Announcement
Xin, Gui-Liang
Liu, Jia-qian
Liu, Jia
Complete chloroplast genome of an endangered tree species, Toona ciliata (Sapindales: Meliaceae)
title Complete chloroplast genome of an endangered tree species, Toona ciliata (Sapindales: Meliaceae)
title_full Complete chloroplast genome of an endangered tree species, Toona ciliata (Sapindales: Meliaceae)
title_fullStr Complete chloroplast genome of an endangered tree species, Toona ciliata (Sapindales: Meliaceae)
title_full_unstemmed Complete chloroplast genome of an endangered tree species, Toona ciliata (Sapindales: Meliaceae)
title_short Complete chloroplast genome of an endangered tree species, Toona ciliata (Sapindales: Meliaceae)
title_sort complete chloroplast genome of an endangered tree species, toona ciliata (sapindales: meliaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799959/
https://www.ncbi.nlm.nih.gov/pubmed/33474276
http://dx.doi.org/10.1080/23802359.2018.1476074
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