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The complete mitochondrial genome of the cowpea weevil, Callosobruchus maculates (Coleoptera: Chrysomelidae: Bruchinae) and a related phylogenetic analysis of Chrysomelidae
In this study, the complete 17,809 bp mitochondrial genome of Callosobruchus maculates (F.) (Coleoptera: Chrysomelidae: Bruchinae) was sequenced using Illumina’s HiSeq2000 platform. The mitogenome is a double-stranded circular molecule of 17,809 bp in length with 21 transfer RNA genes, 13 protein-co...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799975/ https://www.ncbi.nlm.nih.gov/pubmed/33474270 http://dx.doi.org/10.1080/23802359.2017.1413308 |
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author | Zhang, Li-Jie Wu, Ling Wei, Chun-Yan Liu, Xing-Liang Xue, Huai-Jun Yang, Xing-Ke Nie, Rui-E |
author_facet | Zhang, Li-Jie Wu, Ling Wei, Chun-Yan Liu, Xing-Liang Xue, Huai-Jun Yang, Xing-Ke Nie, Rui-E |
author_sort | Zhang, Li-Jie |
collection | PubMed |
description | In this study, the complete 17,809 bp mitochondrial genome of Callosobruchus maculates (F.) (Coleoptera: Chrysomelidae: Bruchinae) was sequenced using Illumina’s HiSeq2000 platform. The mitogenome is a double-stranded circular molecule of 17,809 bp in length with 21 transfer RNA genes, 13 protein-coding genes, and two ribosomal RNA genes as in other insects. Specially, there is a 2008 bp-inserted segment between ND2 and tRNA-Trp from 1180 to 3187, which cannot be aligned to any known gene of mitogenomes. To estimate the taxonomic status of Bruchinae, total 17 species from eight subfamilies of Chrysomelidae were selected as ingroups and three species of Lamiinae as outgroups for phylogenetic analysis based on mitogenome. The results showed that three major lineages were formed, including a basal ‘Eumolpine’ clade (Cassidinae, Eumolpinae, Cryptocephalinae, Clytrinae), ‘'Criocerine’ clade (Criocerinae, Bruchinae) and ‘Chrysomeline’ clade (Chrysomelinae, Galerucinae s. l.). Bruchinae showed more closed relationship with Criocerinae than other subfamilies. More thorough taxon sampling will be needed to well understand the relationship in Chrysomelidae. |
format | Online Article Text |
id | pubmed-7799975 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77999752021-01-19 The complete mitochondrial genome of the cowpea weevil, Callosobruchus maculates (Coleoptera: Chrysomelidae: Bruchinae) and a related phylogenetic analysis of Chrysomelidae Zhang, Li-Jie Wu, Ling Wei, Chun-Yan Liu, Xing-Liang Xue, Huai-Jun Yang, Xing-Ke Nie, Rui-E Mitochondrial DNA B Resour MitoGenome Announcement In this study, the complete 17,809 bp mitochondrial genome of Callosobruchus maculates (F.) (Coleoptera: Chrysomelidae: Bruchinae) was sequenced using Illumina’s HiSeq2000 platform. The mitogenome is a double-stranded circular molecule of 17,809 bp in length with 21 transfer RNA genes, 13 protein-coding genes, and two ribosomal RNA genes as in other insects. Specially, there is a 2008 bp-inserted segment between ND2 and tRNA-Trp from 1180 to 3187, which cannot be aligned to any known gene of mitogenomes. To estimate the taxonomic status of Bruchinae, total 17 species from eight subfamilies of Chrysomelidae were selected as ingroups and three species of Lamiinae as outgroups for phylogenetic analysis based on mitogenome. The results showed that three major lineages were formed, including a basal ‘Eumolpine’ clade (Cassidinae, Eumolpinae, Cryptocephalinae, Clytrinae), ‘'Criocerine’ clade (Criocerinae, Bruchinae) and ‘Chrysomeline’ clade (Chrysomelinae, Galerucinae s. l.). Bruchinae showed more closed relationship with Criocerinae than other subfamilies. More thorough taxon sampling will be needed to well understand the relationship in Chrysomelidae. Taylor & Francis 2018-05-26 /pmc/articles/PMC7799975/ /pubmed/33474270 http://dx.doi.org/10.1080/23802359.2017.1413308 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | MitoGenome Announcement Zhang, Li-Jie Wu, Ling Wei, Chun-Yan Liu, Xing-Liang Xue, Huai-Jun Yang, Xing-Ke Nie, Rui-E The complete mitochondrial genome of the cowpea weevil, Callosobruchus maculates (Coleoptera: Chrysomelidae: Bruchinae) and a related phylogenetic analysis of Chrysomelidae |
title | The complete mitochondrial genome of the cowpea weevil, Callosobruchus maculates (Coleoptera: Chrysomelidae: Bruchinae) and a related phylogenetic analysis of Chrysomelidae |
title_full | The complete mitochondrial genome of the cowpea weevil, Callosobruchus maculates (Coleoptera: Chrysomelidae: Bruchinae) and a related phylogenetic analysis of Chrysomelidae |
title_fullStr | The complete mitochondrial genome of the cowpea weevil, Callosobruchus maculates (Coleoptera: Chrysomelidae: Bruchinae) and a related phylogenetic analysis of Chrysomelidae |
title_full_unstemmed | The complete mitochondrial genome of the cowpea weevil, Callosobruchus maculates (Coleoptera: Chrysomelidae: Bruchinae) and a related phylogenetic analysis of Chrysomelidae |
title_short | The complete mitochondrial genome of the cowpea weevil, Callosobruchus maculates (Coleoptera: Chrysomelidae: Bruchinae) and a related phylogenetic analysis of Chrysomelidae |
title_sort | complete mitochondrial genome of the cowpea weevil, callosobruchus maculates (coleoptera: chrysomelidae: bruchinae) and a related phylogenetic analysis of chrysomelidae |
topic | MitoGenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799975/ https://www.ncbi.nlm.nih.gov/pubmed/33474270 http://dx.doi.org/10.1080/23802359.2017.1413308 |
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