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The complete mitochondrial genome of the cowpea weevil, Callosobruchus maculates (Coleoptera: Chrysomelidae: Bruchinae) and a related phylogenetic analysis of Chrysomelidae

In this study, the complete 17,809 bp mitochondrial genome of Callosobruchus maculates (F.) (Coleoptera: Chrysomelidae: Bruchinae) was sequenced using Illumina’s HiSeq2000 platform. The mitogenome is a double-stranded circular molecule of 17,809 bp in length with 21 transfer RNA genes, 13 protein-co...

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Autores principales: Zhang, Li-Jie, Wu, Ling, Wei, Chun-Yan, Liu, Xing-Liang, Xue, Huai-Jun, Yang, Xing-Ke, Nie, Rui-E
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799975/
https://www.ncbi.nlm.nih.gov/pubmed/33474270
http://dx.doi.org/10.1080/23802359.2017.1413308
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author Zhang, Li-Jie
Wu, Ling
Wei, Chun-Yan
Liu, Xing-Liang
Xue, Huai-Jun
Yang, Xing-Ke
Nie, Rui-E
author_facet Zhang, Li-Jie
Wu, Ling
Wei, Chun-Yan
Liu, Xing-Liang
Xue, Huai-Jun
Yang, Xing-Ke
Nie, Rui-E
author_sort Zhang, Li-Jie
collection PubMed
description In this study, the complete 17,809 bp mitochondrial genome of Callosobruchus maculates (F.) (Coleoptera: Chrysomelidae: Bruchinae) was sequenced using Illumina’s HiSeq2000 platform. The mitogenome is a double-stranded circular molecule of 17,809 bp in length with 21 transfer RNA genes, 13 protein-coding genes, and two ribosomal RNA genes as in other insects. Specially, there is a 2008 bp-inserted segment between ND2 and tRNA-Trp from 1180 to 3187, which cannot be aligned to any known gene of mitogenomes. To estimate the taxonomic status of Bruchinae, total 17 species from eight subfamilies of Chrysomelidae were selected as ingroups and three species of Lamiinae as outgroups for phylogenetic analysis based on mitogenome. The results showed that three major lineages were formed, including a basal ‘Eumolpine’ clade (Cassidinae, Eumolpinae, Cryptocephalinae, Clytrinae), ‘'Criocerine’ clade (Criocerinae, Bruchinae) and ‘Chrysomeline’ clade (Chrysomelinae, Galerucinae s. l.). Bruchinae showed more closed relationship with Criocerinae than other subfamilies. More thorough taxon sampling will be needed to well understand the relationship in Chrysomelidae.
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spelling pubmed-77999752021-01-19 The complete mitochondrial genome of the cowpea weevil, Callosobruchus maculates (Coleoptera: Chrysomelidae: Bruchinae) and a related phylogenetic analysis of Chrysomelidae Zhang, Li-Jie Wu, Ling Wei, Chun-Yan Liu, Xing-Liang Xue, Huai-Jun Yang, Xing-Ke Nie, Rui-E Mitochondrial DNA B Resour MitoGenome Announcement In this study, the complete 17,809 bp mitochondrial genome of Callosobruchus maculates (F.) (Coleoptera: Chrysomelidae: Bruchinae) was sequenced using Illumina’s HiSeq2000 platform. The mitogenome is a double-stranded circular molecule of 17,809 bp in length with 21 transfer RNA genes, 13 protein-coding genes, and two ribosomal RNA genes as in other insects. Specially, there is a 2008 bp-inserted segment between ND2 and tRNA-Trp from 1180 to 3187, which cannot be aligned to any known gene of mitogenomes. To estimate the taxonomic status of Bruchinae, total 17 species from eight subfamilies of Chrysomelidae were selected as ingroups and three species of Lamiinae as outgroups for phylogenetic analysis based on mitogenome. The results showed that three major lineages were formed, including a basal ‘Eumolpine’ clade (Cassidinae, Eumolpinae, Cryptocephalinae, Clytrinae), ‘'Criocerine’ clade (Criocerinae, Bruchinae) and ‘Chrysomeline’ clade (Chrysomelinae, Galerucinae s. l.). Bruchinae showed more closed relationship with Criocerinae than other subfamilies. More thorough taxon sampling will be needed to well understand the relationship in Chrysomelidae. Taylor & Francis 2018-05-26 /pmc/articles/PMC7799975/ /pubmed/33474270 http://dx.doi.org/10.1080/23802359.2017.1413308 Text en © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle MitoGenome Announcement
Zhang, Li-Jie
Wu, Ling
Wei, Chun-Yan
Liu, Xing-Liang
Xue, Huai-Jun
Yang, Xing-Ke
Nie, Rui-E
The complete mitochondrial genome of the cowpea weevil, Callosobruchus maculates (Coleoptera: Chrysomelidae: Bruchinae) and a related phylogenetic analysis of Chrysomelidae
title The complete mitochondrial genome of the cowpea weevil, Callosobruchus maculates (Coleoptera: Chrysomelidae: Bruchinae) and a related phylogenetic analysis of Chrysomelidae
title_full The complete mitochondrial genome of the cowpea weevil, Callosobruchus maculates (Coleoptera: Chrysomelidae: Bruchinae) and a related phylogenetic analysis of Chrysomelidae
title_fullStr The complete mitochondrial genome of the cowpea weevil, Callosobruchus maculates (Coleoptera: Chrysomelidae: Bruchinae) and a related phylogenetic analysis of Chrysomelidae
title_full_unstemmed The complete mitochondrial genome of the cowpea weevil, Callosobruchus maculates (Coleoptera: Chrysomelidae: Bruchinae) and a related phylogenetic analysis of Chrysomelidae
title_short The complete mitochondrial genome of the cowpea weevil, Callosobruchus maculates (Coleoptera: Chrysomelidae: Bruchinae) and a related phylogenetic analysis of Chrysomelidae
title_sort complete mitochondrial genome of the cowpea weevil, callosobruchus maculates (coleoptera: chrysomelidae: bruchinae) and a related phylogenetic analysis of chrysomelidae
topic MitoGenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7799975/
https://www.ncbi.nlm.nih.gov/pubmed/33474270
http://dx.doi.org/10.1080/23802359.2017.1413308
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